Microarray Probes on PGSC0003DMT400000986
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26542_PI426222305 |
JHI_St_60k_v1 |
ATTGGTTGAGTCAACTCAGAGTTTATTCGAATCAGATGAATGGTGGGATAATAATTATGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000986
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000986 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G77200.1 |
+1 |
4e-41 |
145 |
100/214 (47%) |
Integrase-type DNA-binding superfamily protein | chr1:29004357-29005091 REVERSE LENGTH=244 |
Transcript Sequence (915 bp)
>PGSC0003DMT400000986 915 pgsc_dm_v3.4
ATGTCTACAGAGCAACCAAATTGTTCAGAAAGTACTGAATCTAGCTGCAACTCTTCTTCT
TCTTCGCCGCCCTCATCGCCATCTTTTGTTCTTCTTCAACCACTTCCGCAAATCAATTCG
AAAAATCGACTCAAAAGATGCAGAGGAGAAGAAGAAGAAGTAAACGAAGTCGTTAATAAT
GCAAACCCAAATCCGAAGAAGATCAGTAAAAACAACAATGGTGGTAGTACTGATGTTTCG
TATGTAGGTGTACGAATGAGAGCATGGGGTAAATGGGTATCCGAAATCCGTGAACCTAAA
AAGAAATCACGGATTTGGTTGGGTACCTTCGCTACCCCGGAAATGGCGGCGCGTGCTCAC
GACGTAGCCGCCATGTCCATTAAAGGAACCTCAGCAATACTCAATTTCCCCCAATTTTCT
CATTTATTGCCCCGACCCGCCACGTGCTCCCCACGTGACGTCCAATCCGCCGCCGTAAAA
GCCGCTCACATGGATCACCTAAACCCAAAAAACTCTTCCTCCTCCTGCTCCACCTCCACC
TCCTTGTTGCCCGAACCCTCGCCAGCGTCGATGACGTCATCCTCATCGTCGCTGTCGTTG
GCTTCGGGCATTACATCGTCATCGTCCTGTGAAAAGGACGACGAAGAGTCAAGACCGTCG
CCTCTGGAAGAAGTATTTCTTGTTCCGGAGGCGACGGGGCAGCTGAGTGAGATAGTAGAG
CTGCCGAGATTGGGATCGAGTTATGAATTGGTTGAGTCAACTCAGAGTTTATTCGAATCA
GATGAATGGTGGGATAATAATTATGGAAATTGTGAATATTATTTTGGTCAAGAAAATTAT
ATTAGTAATATGGAATTTACAGGATTAGAAAATGTGGTTTCAACCAGTTTTGAGAGTTTT
TTATGGCAACATTAG
