Microarray Probes on PGSC0003DMT400000956
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26524_PI426222305 |
JHI_St_60k_v1 |
CAAAAATTGCAGATTTTGGCCTTGCCAGGATGTTGCTCAAGCCTGGAGATAACACAGTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000956
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000956 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G25930.1 |
+2 |
0.0 |
971 |
521/986 (53%) |
Protein kinase family protein with leucine-rich repeat domain | chr5:9050880-9053978 FORWARD LENGTH=1005 |
Transcript Sequence (4439 bp)
>PGSC0003DMT400000956 4439 pgsc_dm_v3.4
TTTTTACCAAATGTTCATAGAAACTTAGAAAAAATCACCAAAAAAAATGTCCAAAATTAT
TTTTTCACTTTTCATTTTTCTGCTTTTCATCATTTCTCATGGAAAATCCCAAGAATCTCC
AAATCAAGAAAAGGCCATTTTACTCCAACTAAAACAACACTGGTTTACTTCACCAAATGT
CACAAAATGGATTTCATCATCAAATCATTGTTCTTGGGATGGAATAATTTGTACCCAAAA
TTTAGTTTCTGGTATTCAAATCCCTTTTGGAAATATCTCAAAACCAATCCCAAATTTCAT
TTGTGATCTTAAAAATCTCACCTTTCTTGATTTGAACCATAATTTCATCCCTGGAAACTT
CCCTGATATCTACAATTGTTCAAATCTTGAATTCTTAGACCTTTCTTATAACTACATGGC
TGGTAATCTCCCTGATGAGATTAACCGTCTTTCGAGTAATCTAAAATACCTAAACTTAAC
TTCCAACAACTTCAATGGTGATATCCCTAAAGGAATTGGTGGATTGAGTCAGCTCAAAGT
ACTTGACCTGAGGGGGAATTTGTTTAATGGATCTTTTCCTGAAGAGATTGGTGAATTGTT
GAATCTTGAAGCACTTATGTTGAGCTCGAATGGTTTTGCTCCACAGGCTATACCATCACG
ATTCACCAAGTTGAAAAATTTGAAAATTTTTTGGATGACAGAAGCACATTTGATTGGAAA
TATCCCGGAATATATTGGTAACATGACAAGTCTTGAATTTTTGGATTTGTCGAACAATGG
ATTGAGTGGTAGTATCCCTGATGGTTTGTTTCAGCTCAAGAACTTGAGTATTGTGTATTT
ATTTACTAACAAATTGTCAGGGGAAATACCACAGTCAGTTTCATCAATGAATTTAGATGT
TGTTGATTTGTGTAACAACAGTTTGACAGGAAAAATACCAGAAGATTTCGGAAAGTTGAC
GAAACTGAGTGGATTGGCTTTGTTTTTCAATCAATTATCAGGGGAAATACCTTTGAGTAT
AGGCAAATTATCATCATTGGTATCTGTTAAGTTGTTTGGGAACAAGTTATCAGGTGAAAT
TCCACCTGATTTTGGTCGATTTTCGAAACTTTTTGACTTCCAAGTTTCAGAAAATCAACT
TGTTGGAAAGCTACCTGAGGGTATTTGCAATAACAAGGCATTAGCTAGGATGGTTGCTTT
TGGCAACAATCTAACAGGTGAACTGCCAAGTTCACTTGGAAGTTGTGACAGTCTGAGGTA
TCTTCGAGTCGAAAATAACCGACTTTCTGGTGAGGTTCCTGATGGATTATGGACAGGTAA
GAGTTTGTCAATGGTTTTGATGAAGAATAACTTGTTAACTGGTCAGCTTCCACATAGAGT
GGCATCAAATTTGTCACAAGTTGATATCAGCAATAACAAGTTTTCGGGGGAATTACCAGC
TGGTATGGGTACTTGGTACAATCTAAGTGAGTTCAAGGCAAGTAATAATCTCTTAAGTGG
TCAAATCCCTCAAGAATTGACTCTTCTTCCAGGGATAACTAAACTTTTTCTTGATGGTAA
TCTACTATCTGGAAATTTTCCATCGAATATATCGTCGTGGAAGACTCTTGTCACATTAAA
TAGCAGAAAAAATCAGCTTTCAGGTCCTATACCTTCTGCACTTGGCCTTTTACCAAATCT
CATTGATTTGGACTTGTCAAGTAACCAATTTTCAGGTGTTATTCCAACTGAATTAGGTAA
CTTGAGGTTTACTTCACTTAACCTGTCATCCAATCGCCTGTCGGGTGAAATCCCATCTCA
GTTGGAAAATGCAGGTTTTGGTAAGAGCTTCTTGGATAATCCTGGTCTTTGTGCAATTAA
TCCATCAGTAGAAGTCGCGTCTTGCAAGAGGGAAACTAAGTCAGATAAGTTTCCTGTTGG
ACTTGTTGCTGCTCTTGCTAGTGTAGCAGCAGTTACTTTCCTTGTGGCAGTTCTGTATGG
TCTGTTTGTGTTGAGAAGTCATAGAAAAAGAAAACAAGAATCAGTTTTGACATGGAAACA
AACATCATTTCACAAATTAGACTTCACGGAATCAGACATTGTATCCAATCTGACCGAAAA
CAACATAATTGGAAGTGGAGGATCGGGACAGGTCTACCTCGTGCCTTTAAGCCGATCAGG
TGACTATGTTGCTGTCAAGAGGATTTGGAGAAACCAAAGGTTGGATCACAAGCATGAGAA
ACAGTTTCTTGCTGAAGTTCAGATATTAGGCACGATTCGACACACCAATATAGTGAAACT
CCTCTGCTGCATCTTCAGTGAAGAGTCGAAACTTCTTGTCTACGAATATATGGAGAACAG
GAGCTTGGATATATGGCTTCACTCAAAGAATAGGTTGAACAATGCCTCAAGATCAACACC
ACATCTGGTCTTGGAATGGCCTAGGAGGCTGCAAATCGCGATAGGAGCTGCCCGTGGTAT
TTGCTACATGCACCATGACTGCTCACCACCTATTATTCATCGCGATGTGAAGTCAAGCAA
CATCCTATTGGATTCCCAATTCAATGCAAAAATTGCAGATTTTGGCCTTGCCAGGATGTT
GCTCAAGCCTGGAGATAACACAGTGACAGCAGTAGCTGGCTCTTTCGGATACATTGCACC
AGAGTATGCACGAAAAACTAGAGTGACAGAGAAAATTGATGTGTATAGTTTTGGAGTCAT
ACTATTGGAACTGGTGACTGGAAAAGAAGCCAATCTTGGAGATGAAGATTCATGTCTTGC
AGACTGGGCATGGCGTCACCTTCAAAAAGGGAAACCGATGGCTGATGCATTAGATGAGGA
CATCAAAGAAACGCGATACTTGGAAGAAATCTTCATTGTGTTTAAGCTTGGAATCTTTTG
CACCAGCACATTTCCTTCATCAAGGCCAACAATGAAGGAAGCTCTGCAAATCTTGATCCA
ATGTAGCAACAGTTCACCGACATCTGGAGAAAAGAAAAATGAAACAGAACAGGATGTTTT
GCCACTCCTCAAGAACTCAAGGAGTGACAGGATTGAAGAAAATGATGATGTTGGTTTAAC
ATCACTTGTTTGATGGCATTACAATATGATTAGAGTGACGGAGAGCCTTGACGTAACTGG
TAAAGTTGTTGTGGAAATAGTCTCTTGCAGAAATGCAGGGTAAGGTTATGTACAATAGAT
TCTTGTGGTCCGGTCCTTCCCAGGACCTTGCTCATAGTGAAACTTCGTGCACCGGGATGC
CTTTTTTTAACAATATGATTAGAGTAAGAAATAGCAAAGAATAAGACCAATAGATAATGT
ATCAGGTAGTGAAAACTAGCATTGTACATACACTGTATTGGATCCATAGTGTTGCTTTGC
ATTGTTTTGCTACATAAATTTTGCTTTTCCAATGTTTTCTTTACTCATAAAATAACTGTC
AAAAAGGTACATTAAAACCATAAACTATTGAATGGAGGATAGATTTCCTAAAAATCCAGA
AAAAATAGAAACAAGTTTGAACTACCTCAGTACTTTAACTTTTGGCAACCATACAACAAC
ATATCCGATGTAATCCCATGAGTCCCAAGCTTTTGGCAACAATACAACAACATATCTGAT
TTAATCCCACAAGTGGCTCTGGGGAGGGTAGAGTGTACGCAAATCCTACCCATATCTCGT
AGAGATAGAGAGGTTGTTTCCGATAGTAACTTTTTGGCAACAATAAATCTTGTAAAAGAT
CACACAAAAATGTGGCTACTAGAAGAACTTTATTTGTATCCTAGCTTTATTTCTGGCTAG
TGAGGAAAAAATTTAAGTTTACACTTGGGATAAAGATGATCCTTAGAGGCACCAGGAGTG
AAAAGGTCAGCATATTGATGTTTAGCTGAAGAGAGATGTGCTCATTTGATACATTGAACT
ATGGCTCACTTCAAAGCTCACTCTTGCATGATGCGGTGCACAAGGAAGCAAGAAATATTT
CAATCATCTCGGAGAAGAAAGTAAGAAGAGGGTTCTCTTTAGCAAGAAGAGGGGTGATTG
TAAACGTACAAACTTTGACTAGGCACTTTTGGTTGTGTCACTCTGACCATGATCATGATT
CCTCGAGATCTGTGTATTGGGAATGCGAGGCAGCCAAAAGTGCAGCTCCAACACCTGAAC
CATCATTAGAAAGCTCAATGACTATGCTGTCCGCAGTGTCTCCCAGTAACTCTTTCATAG
TTTCCTCCAAGCAATTTCTGAACTTGGTGTAACGCTCAAACAATGCACCGTCCACAGCTA
TGACAGACCTCTGGTTCTCTCCGTCCTTCAAAGTGTCTTTTCCCAATTTCTTGAGGATGC
CCACGATTCCTGCTGCAGAAAGACGAGCTCCACGAGAGGTGATAATGTCGCATAGCTCCA
CAACTATTTTCCTCATTTTCAAGGTAGAATTAGGTACCTGTGAAAAAAATGTATATATA
