Microarray Probes on PGSC0003DMT400000933
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26594_PI426222305 |
JHI_St_60k_v1 |
CCAAAAATGGCAAAGTAAAGATGGGGTGTTGTGTTTGTTTTGATATTTGAAGAATGGCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000933
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000933 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G19810.1 |
+3 |
1e-106 |
326 |
197/382 (52%) |
CCCH-type zinc finger family protein | chr2:8550419-8551498 FORWARD LENGTH=359 |
Transcript Sequence (1505 bp)
>PGSC0003DMT400000933 1505 pgsc_dm_v3.4
CACCGCCTGAACTTCAAATCGCCACCACCTTTTCAACTAGCAAAATGATCGGAGAAAGAA
GCCGTCGGATTCCGACGATCGATGTTCCACCGTGGCCGTACTCCGATGATCAGACGGTGA
ACATGCAGTTCATGCTAAGCCCTAGTACAAATTCCATTTCTACCCCTAATAATTACAATT
ACAGTAACTTTGTTGTTGAAGATGATTATTCTCTGTTTTTACAAAACGATGCGGAAGATA
TCGATGAATTTGAGTTGGAAAATCGTGAGATTGAACTTCCGGTTGATGTTTACGCTTGTG
ATAATTTCAGGATGTATGAGTTTAAAGTGAAGAGATGTGGACGTGGAAGGTCACACGATT
GGACGGAATGTCCGTATGTTCATCCCGGTGAGAAAGCTCGCCGGAGAGATCCACGGAAGT
TTCACTATTCCGGTACTGCATGCCCGGAATTTCGTAAAGGGAATTGTAACAGAGGTGATG
GGTGTGAGTACGCACACGGCGTATTTGAGTGTTGGTTACACCCAGGTCGCTATCGTACGC
AGCCTTGTAAAGATGGTGGTAACTGTAAAAGAAGGGTTTGTTTCTTCGCTCACTCGCCTG
AGCAACTCAGAGTATTGGCTCCGGGTTCGGGTTCAGATTCGCCTCGACGGTATGTTAAAG
CTTTGCATTTTGTTTCATCGCCTGAATCGAGTTCGCCGCCGACGGAGTCACCACCGATGT
CTCCGATGACGGCGAACTCGTTTACCTCACTGAGTCGATCACTCGGGTCGAACTCAGTGA
ATGAAGTAATGGCTTCACTGCGTCAGCTACAGTTAAACAGGTTGAATTCCATGCCTTCAT
CATGGAATGTACATATGGGTTCACCTGTACTCGGGTCACCTAGACGACCCATCATCCGAC
CCGGTTTTTATAGCTTACCTGCAACTCCATCTGGAGATCCGACCCGACCCAGAAACCGTT
GTTTCGATCTATGGGAAAATGGGGAATGTGAAGAAGAACCTGTCATGGAGAGAGTTGAAT
CAGGAAGGGATTTAAGGGTGCAGATGTTTGAGAGGCTAAGCAAGGAGAATCCACTCGACG
ATCCGGTAAACCCGAACCCGAATTGCAATTCGGGTCAGGGTCCAAATCCGGATGTCGGGT
GGATTTCGGATCTGATCCAGTAAATGGTGGGTCTTTTTTGTGTTTTCCTCATTTTGGAAG
CTAAAATTGAAGGATATTATGTATATTATTATTATATAATATAGTAAGAATTTAATAGTG
GTAATGGATATGGGGAATTATGTTTGGTTGTAAAGGGGAAAGTGAAAATTTAGGAAGTTT
TTTTTTGAAGGAATTGTAGGGAGCTATTATTATTATTAAAAAACAAAAATACCCCAATCT
TTAGAACGATTTTTTTTTTATAAATGTTTAGAGCCAAAAATGGCAAAGTAAAGATGGGGT
GTTGTGTTTGTTTTGATATTTGAAGAATGGCAAATTGTAATCCTTTTGTTGTATGTTTAT
GTACA
