Microarray Probes on PGSC0003DMT400000810
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26567_PI426222305 |
JHI_St_60k_v1 |
TAAGGATGGATGAGTACGTACCATCTGATTCGTGATAGTAAAAGGCTTTTACTTACTTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000810
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000810 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G28890.1 |
+2 |
9e-92 |
289 |
172/397 (43%) |
RING/U-box superfamily protein | chr4:14256437-14257735 REVERSE LENGTH=432 |
Transcript Sequence (1437 bp)
>PGSC0003DMT400000810 1437 pgsc_dm_v3.4
CCACAATCTTAAAAGAGCCTTATACACACAAAATAAGAGGGACATAATTCATTCTAATTT
TCATATCTTACCCTTTCTTTTTCTCATAAATCATTTTTGGTTTACATACGTGATGTCGAA
TTCAGACAGAAGAAGTAACCATATCGCGATTATACTAGTCATAACAATCCTTCAATTTCT
ACTCCTAACTATTGTTAAAGCCAATGACTACAACACATTTCAAGAATTGCCATCAACACA
AGATGAAGCAAACAACTTCAGGCCAAGTATAGCTGTTGTTATTGGTATCCTTTCCATCAT
GTTTTCCCTAACATTCCTTCTACTTCTCTACGCCAAATTCTGTCGTAGATCGCCTCAAGC
TCTCCACAACGCGATGCAAATTGATCAAGATGGACTAACAACGCTCCCAATGGCACGAGT
TTCCTCAGGTATAGACAAAACTATCATAGAATCACTCCCTTTTTTCAGATTCTCTTTGCT
TAAAGGCTCGAGACAAGGCTTAGAATGCGCGGTTTGTTTATCAAGATTCGAAGATGTTGA
AGTCCTTCGATTACTACCAAAATGCAAACATGCATTTCACACAAAATGTATTGATCAATG
GCTTGAAAAACATTCGAGTTGTCCTCTATGCAGACATAAAGTCTGCATTGAGGACAACTC
ATTGTTAACATATTCAAATAGTTTTCGATTTTTAAGAAATGATTCCAATTTGGAACTTTA
TGTACAAAGAGAAGAAAATTGTGGCAGCATGAGTTTCAAGAAAAACGAAGATAGTTTTTT
CGATAAAACAGAGGAAAAACAGAACATAATTGATGATGATGATCATGATATGTTACACAA
GTTCAATCATAAGATTATTGTGTCTGATGTTGTGTTGAAACATCGATGGAGTAACGTTAG
TTCTTCGGATTTCATGTTCTTGAATACTGAAATGATCAATGACATGACGAACAATAGATT
CAACTCATCATTAGAATCAAGAAATTACAACAATAATATTGTAAGTACATCAAATGTGTT
GAGACAAAATGAGAAGAGAAGTATGTCTGAGATTTTGATATGTCCAAGATTTGATGATTT
CAATACTAGGAATTGTAATAGAGACAATTCTATTACTTGTGTTGAGGAAAAAAGGATGAA
ACTTTGGCTTCCAATTGCAAGAAGAACAGTTCAATGGTTTGAAAATAGGGAAAAAAGGTA
TGCAAGACAATCATTCAATGTATAGTTTCTTGTCTTCCATAGGTATTTTTCTTATCTGAT
CTGATGTTCGGTATCTGCTTTCCGACTTGACTAATCTGAATTTGCAATGGGAAGTCTTGT
TTTCGAGGTAAAGTGCAAAGATGACATTTTACTTCGATCAAGTCAGAGATTTTTAACTAA
GGATGGATGAGTACGTACCATCTGATTCGTGATAGTAAAAGGCTTTTACTTACTTTC
