Microarray Probes on PGSC0003DMT400000761
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26545_PI426222305 |
JHI_St_60k_v1 |
CTTTGGAGAAGTGGTCCTAAAGGCCCTAAGGTTCATCATGATTATCTAAGTCATCATAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000761
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000761 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56860.1 |
+1 |
1e-27 |
113 |
83/174 (48%) |
GATA type zinc finger transcription factor family protein | chr5:22989630-22991351 REVERSE LENGTH=398 |
Transcript Sequence (1248 bp)
>PGSC0003DMT400000761 1248 pgsc_dm_v3.4
GTTCATCATGATTATCTAAGTCATCATAACAATAATAATAATAATATTATGTCTCTTGTT
AGTCCTTATAATAATAACTATCAATTTTCTTCATCATCTACAAATTCATCTTGTCAAACT
TTCTTCAATATTTCAACTACTACTAATATTCAAGATCAAAGTGGATATGATTATCATTCT
CATCAATTTCACCAGCCACAACACCAACATGAGGTTGATAATTTTGCTTCAAGATCAAGT
GGATCACATGATCATCTAGAGAAGAAAAACAAGGGACTCAAATTAACCTTGTGTAAAAAA
GGAGAGCAAAAAATGAAGAATTTGAAACTAGAAGATCAAAAGCAACAGATCATAGAAACT
GATTACAGCAGCAACAGCTCTTCCAACAACAATATCATCCCAATTAGGGTTTGTTCTGAT
TGTAACACTACTAAAACCCCTCTTTGGAGAAGTGGTCCTAAAGGCCCTAAGTCTCTTTGT
AACGCATGTGGAATTCGACAAAGAAAAGCAAGGCGAGCAGCAGCGGCAGCAGCAGCAGCA
ACAAATAATGGGACAAATTTCACTAGTACTGAAACAACAACAACAATGAAGATAAAGGTA
CAACAACAAAAGCACAAGATAACAAAAGTGAATACCAATCATGTTGTACCCTTCAAGAAA
AGGTGTAAATTTCTAAGTAACACTACTACTACTCCTGCACCTGTACCTGCACCTGCTCCT
CGTGTTGGTTCATCATCATCATCATCGTCTTATAATAATAACAACGATGTGCAACAAAAG
AAGAACCTTTGTTTCGAGGATTTCTTTGTGAATTTGAGCAATAATTTGGCAATCCATCGC
GTTTTTCCACAGGATGAGAAGGAAGCGGCAATTTTGTTAATGGCATTATCTAGTGGCCTT
GTTCATGGTTAATGTCATTATAAAATTTTCTTGAGTATCCATTATTAGTTTAAATTATTA
ATTAGATGGAGTAGCATCAAATTAGTTGTGTGAAATTGAGCTAGATTAATACTAGTGAGA
GTGAGAGTTGTTATAAGTCAAGCTACAAAATTTTTAATAATTAGTACTTTAATATTAGCT
AGCTAGGAGTTATAATAAGTTTGATATGTGTGTTGGTCATTGATCTTTTGTATGCTCAAT
GATAGTTTTTGAACAAGGTGACAATCAAGAATATTTTGGTCACTTGTTCATCTATTATAG
CCTTGTGTGATGATTTTGAAGTTTATTGAAACAATATTTTATCCAAAA
