Microarray Probes on PGSC0003DMT400000226
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3329_PI426222305 |
JHI_St_60k_v1 |
TACTGTGAATATTACTAGCCAGTCAATTCAAGATCAGAAGTGTACCAAAAAGGTTAAGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000226
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000226 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46150.1 |
+2 |
5e-64 |
204 |
112/224 (50%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221 |
Transcript Sequence (876 bp)
>PGSC0003DMT400000226 876 pgsc_dm_v3.4
AGTTAACACAAACTCAAACACCAAAGTCCCAAAATTTTTACATCTCAAATAGTACAACCA
TTTCTCCTCTTAGTTTCAAGACTCAATAAAAATGGTGGAGAGAGATCAAGTTAGACCACT
AGCTCCAGCATCCGACCAGCCACATAGCAGCGACGAAGATGAAACAATCAAAAAAAGGTT
TCATCAAAGAAGATGTTTCAAATATTGTGTTTGTGTATCAACCTTTCTTTTCCTTCTAGC
CATAATAATCATCATTTTGATCTTCACAGTGTTCAAAATAAAAGACCCTATTATTACAAT
GAACGGTGTCACAGTTGAAAAACTAGACCTCGTTAACACTAGTGGCACCCTTTTACCTAT
ACCTAAACCAGGTTCCAACATGACCATAAAAGCTGATGTCTCAGTGAAAAATCCTAATTA
TTCATCATTTAGGTATAGTAACACGACCACCACTATTTCCTATCGCGATACGGTGGTCGG
GGAGGCGCGGGGCCCACCGGGGAAATCGAAGGCACGGAAGACTATGAGGATGAACGTAAC
GATTGATATTATTACGGACAAAATTGTGTCACATCCTGGCTTACAAGATGATATTAGTAG
TGGTTTGCTTACTATGAATAGCTACACAAGTGTTGGTGGGAGAGTCAAATTGTTGAATAT
GATCAAGAAATATGTTGTTGTGAAGATGAATTGTAGTATTACTGTGAATATTACTAGCCA
GTCAATTCAAGATCAGAAGTGTACCAAAAAGGTTAAGCTTTAGATTGATATATATTACTA
GTAGTTAATTTTTGTCATGATATTTATTTTTTGCTACTACATCTTTAGTTTTGAGTTTTG
TATACTTCTTGTTGTTCATTATAAAATGAGTTTTTT
