Microarray Probes on PGSC0003DMT400097765

Probe IDChipProbe Sequence
CUST_9561_PI426222305 JHI_St_60k_v1 TTTGAATCCTTGCAGTCCCAGAAATGTAGATGTAGAACAAGGAAGCAGGGGACAGAGCTA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400097765

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400097765 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G53820.1 +1 9e-39 139 68/129 (53%) RING/U-box superfamily protein | chr1:20091491-20092423 FORWARD LENGTH=310

Transcript Sequence (786 bp)

>PGSC0003DMT400097765 786 pgsc_dm_v3.4
ATGGGAAGTGGTAAATTAGGTGATTCAGGTATGATTGCGATCACGGCTAAGATCATGATG
GCTGTCGTCGTATTTCTCTTCTTTGCGGTGGTCTTGGTATTTTTCCTTCACATATACGCC
AAATTTTTCACGAGAGAGGACGCCAACCCGAACGACGGCACAAGGCGTCGCCGCCGTCGC
CGGTTCGACTTTGCTGGCGGTTATCAAGAAGTGAATGCACTCCGGAGAGGCCTTGACCCT
TCCATCCTTAAAACCATACCCGTAATTCCATTTAATACCAAGGATTTCAAAGATGGATTG
GAATGCTCCGTTTGTCTTACTGACGTTTCTGATGGTGAAAAGGCGAGACTTTTGCCTAAA
TGCAATCATGGGTTTCATGTCGATTGCATTGATATGTGGTTTCAATCTCATTCCACTTGT
CCTTTATGCCGAAACCCTGTTTCAGAAATGTCCTCTACGAAATCCACCATTGTAGAATCA
AATTCCGGGGCCATTAGGGAACCAGTAGAAGAAGGCTCAGTAGCTTCCACAGAGACACGA
AATTTACCAACTAATGTTCTGTTCTGGGGAGATGAAACTACTACATCATCAGCATCCACA
AGTACTAGTAGGCCAGATGGGGTTTTGATGATTGATATTCCAAGACAGAATACTGAAGAG
GCAGAAAAAGAACAGAAAACACCAACACCGACACGATTGAGATCTTTAACGAGGCTTTTT
AGCAGTTTGAATCCTTGCAGTCCCAGAAATGTAGATGTAGAACAAGGAAGCAGGGGACAG
AGCTAG