Microarray Probes on PGSC0003DMT400084206
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13740_PI426222305 |
JHI_St_60k_v1 |
TACCGGGTGTATTGACAGGATCAAAGCAATTTTCATGTGTATCCTGATTGGGCTGCCATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084206
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084206 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46270.1 |
+2 |
7e-73 |
241 |
179/393 (46%) |
G-box binding factor 3 | chr2:19000859-19002901 FORWARD LENGTH=382 |
Transcript Sequence (1828 bp)
>PGSC0003DMT400084206 1828 pgsc_dm_v3.4
GGTGTATTGACAGGATCAAAGCAATTTTCATGTGTATCCTGATTGGGCTGCCATGCAGGC
ATATTATGGTCATCGAGTAGCTGTACCTCCATATGTTAATCCTGCTGTTGCACCTGGTCA
TGCTCCTCATCCTTACATGTGGGGCCCGCTACCGCCTATGATGCCACCTTATGGCACACC
ATATGCAGGAGTCTATGCACATGGTGGTGTTTATCCGCACCCTGGAGTTCCTATTGTGTC
CCGTCCTCAGGCACATGGAATGACATCATCTCCTGCTGTTAGCCAAACCATGAATACTGC
TTCTTTGAGTATGGATGCTTCTGCTAAGTCTTCGGGGAACTCTGATCAAGGCTTGATGAG
TCAGTCAAAAGGGTTTAATGGGCTTGGAATGTCAATTGGAAATTTCACTGTTGACAATGG
TGATGGCACTGACCATGGACCTTCTCAGAGTGGGCAAACTGAAGGTTCAAGTGATGGAAG
TAACATACACACAGCAGAGGTTGGTGAGCACAGGAAGAAAAGAAGCCGCGAGGCAACTCC
TAATAACTCTGGTGACAGAAAAAGTCAAAGACTGTGCAGTCCACAACGTACTAAGGAAGT
AAATGGGGCCTCAGAGAAGGGAATTGGTAATCCTGGTGATATAGCAGAAAAATTAGCGGG
AACAACATTTTCTCCCATCATGACTACTACTCCGCTAGTAAAATCTAGTCCAACTTCACG
AATCAGTCCTGCAGTGCCGGGCGAAGTCTGGTTACAGAATGAACATGAGCTGAAGCGGGA
GAAGAGGAAGCAGTCTAATCGAGAATCTGCAAGGAGATCAAGGTTGAGAAAACAGGCGGA
AGCTGAAGAATTGGCAGTGCGGGTTCAATCTTTAACCTCTGAAAATTTGGCACTCAGATC
AGAAATAAACAAATTCAGCGAACACTCTGAGAAACTAAAGGTTGAAAATGCTGCTTTAAT
GGAGAGACTAAAAAACAAGCTAGGACAAGCAAAAGAGGTAACTTTAGGTATGATTGATGA
TAAGAGGCTGAAGCCTGTTAGCACAGCAGACCTACTAGCAAGAGTCAACAACAACAATGG
TTCATTCAATAGAACCAACGAAGACGGTGAAGTTCATGATAGTACATCTGGAGCAAAGCT
TCGTCAACTCCTTGATGCCAGTCCCAGGACTGATCATGCTGTGGCTGCTAGATGATCATC
GACTAATATTCATGACCGTGGCAGTGTGGTGCCTACTTTGAGATGATAAAAGTAAAAGAA
ATTTAACAGTACAGAGGTGCTGAAGAAATTCTAATTTCGTCTAATTGTAATTTATCCATG
GATGAAGCTGAGGAGTGTGTTTTTGGTCCCTTCACTTCAGAGTGCCACGTTGCATGATGT
CTTATGTAAATTGGTAATGTTAGCCACATTAGAAACTTGACTGATTGAAAAGAGTTTGGC
TTGGATGTGTATGGAGCAGTCAACAAGTGATCTTTGTGATGTATTTGGTGTTTGTTTGTT
AGTTATTAAGCCTTAGCTAGTGCTAAACATATTATCCTTCGTCTCGGGTTCGAGTCCATG
TGTACGGAGTTGCCTTTGTTATGGAGCGCTTTACCCCTCAATGTGGGATCAATGTGAATT
CGGATTTGGTCGGGCTCCAATGGACATGGTATAAGTTAGGTGTAAGATAATTTTGTATTA
GGTTGATTTTAACTCAATCCAATATAGCATATTTTATAAGTGATATCCGAGACAAGTACC
TTTGAACTGTGAAAGTGTTCTCTTCTTGTTCTTTGAATTTGTTCTTGTACAGAGTTGAGT
GTATTTTCTACGACTATATACTTCCTCT
