Microarray Probes on PGSC0003DMT400081777
Probe ID | Chip | Probe Sequence |
---|
CUST_27922_PI426222305 |
JHI_St_60k_v1 |
TGTCAACTTTGGTTTAGCTCTAGCTAGACATCCTAGTATCCAATTGGTTTGGTCTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081777
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081777 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G17860.1 |
+2 |
3e-39 |
146 |
119/343 (35%) |
jasmonate-zim-domain protein 3 | chr3:6119968-6122691 FORWARD LENGTH=352 |
Transcript Sequence (1361 bp)
>PGSC0003DMT400081777 1361 pgsc_dm_v3.4
CTATAAACTATTTCTCTTTCATTCCTTTCTCACTTTTCTTTGCTTTTGGGTTTCTGGGGT
TTCTTGTTTTTTTTTTCTAGTTTTGTTTGAGTTTGATCTGCTTCTTGGGGTTCTTTAAAT
TTTCTTGAAATCTTGAATTTTGGGTGTTTCTTGAAAATTCAAAGAGATGGAGAGGGACTT
TATGGGATTGAATATTAAAGATTCTTTAGCTGTAGTCAAGGAAGAACCTGTTGAAAGCTC
CAAAGACTCTGGGTTTCGCTGGCCAATGTCGAGTAAGGTTGGTGTACCTCATTTCATGTC
CTTGAACTCTGCTCACGATGAGAACACCTTCAAAGCTCTATCTGCCACAGATGGAGTCGA
TGCTGGTGTCAAACGTCAGTCTGGTGAACTCCAGATGAAGCAAGTTCTTGGTGGAATTCC
TGTTACAGCTCCACATTCAATGCTTCCATCGCGTGGCTCTGTGGCTGGGACAACCGAACC
TTGGTTTAATTCCAAAAGTTGTGCAGCACCTGCTCAACTGACCATCTTCTATGGTGGGAC
GGTCAATGTCTTCGAGGATATCTCCCCTGAGAAGGCACAGGCTATTATGTTTTTGGCTGG
ACATGGCTGCGCTCCACCTAATGTGGTGCAACCAAGGTTTCAACTTCAGGCATCTGCATC
GAAACCTGCTGCTGCGGATGGTGTTTGTGTGAACCAAACCCCAAACATGCTGCCTGCCTC
GGGTCTTTCTAGCCCTATGTCCGTTTCTTCCCATCCTATTGGTCAATCTGATGGCAGTTC
TGGAAACAAAGATGACATGAAGATGTCTAAAACTGCAAACAGTTCAGTGACTCCCCTTGT
CAAATTGGACACTTCAAAGATTGTGACATCACTAGGACCTGTTGGGGCGACTACCATAAT
GACAGCAGCGGTTCCACAAGCTAGGAAAGCATCTCTGGCTCGTTTTCTGGAGAAGCGTAA
GGAAAGGGTGATGAACTTAGCACCATATTGCCTCAGCAAGAAATCGCCCGAGTACTCCAC
CCCCGAGTCTAATGGAGTTGGTTTCTCTGCAACTTCCAGTCCTCTATTAGCTGGTAAGGA
GACCTAGCTATGATCTCTGAAGACTGCTTAACGCCGTAAATCAGTGAAGCATAATCTATT
TTATTCAGCAAGTTAAAATCTGTGTAGCTATCAAGTTTTGTTTGTTGTAATTTGTAATGT
CAACTTTGGTTTAGCTCTAGCTAGACATCCTAGTATCCAATTGGTTTGGTCTTTTTTTTT
CTGAAACCTGATGGAATATTTCCCATCCAAATAACTTCTTCAATTTGTAACTATTTATTT
TGTTACATTGTGTTTCACAAGTATATATATATATATATATA