Microarray Probes on PGSC0003DMT400078267
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22540_PI426222305 |
JHI_St_60k_v1 |
GACGATACATATGGTAGTTTTAAGCAGATGAGAGTTTGAATTAAGCAGCTGATGTAATTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078267
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078267 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G58350.1 |
+3 |
1e-154 |
471 |
265/498 (53%) |
with no lysine (K) kinase 4 | chr5:23585505-23587681 FORWARD LENGTH=571 |
Transcript Sequence (2770 bp)
>PGSC0003DMT400078267 2770 pgsc_dm_v3.4
GATCAATTTTGCATTTACAGTTCTTGATTTGTTGATTTCCATAAGTAGAACAGATTAAGT
TACTGTTTTTGTTGATTCTTGATTATGTTTGGCATTTTGGTGTTTATGCATGTGCGGACA
GTTCGAGGAAGTTTTGGGAAAAGGGGCAATGAAAACAGTTTATAGGGCAATTGATGAGTT
GTTAGGTATGGAAGTGGCATGGAGCCAAATTAGACTTAATGATTTGCTTCAGTCACCAGA
GGATATAGAGAGGCTTTACTCTGAAGTTCATTTGCTTAGCACTCTGAATCATCCTTCTAT
CATGAAATTCTATACTTCATGGATCGATATCGAAAAGAGGACCTTTAATTTCATTACTGA
GTTGTTCACTTCCGGTACTCTCCGAGGGTAATGCTCTATTCCTTGTCTATCGTAATTGTT
CTCTTCGAATTGCAGTGATTTTAAGTTATGCTGTGAAGTATATGGAAAGTTATGAGCAGT
GACGAATCCATAATTTAGAGTCCCATGGGTACGAATCGTTAAATCAACTCTGTGGAGATT
GTGAGTCTCGTGTTTCTACCATTTCACCAGCAAGGCATCCTGAAAGTGAATCGTATTCCA
TGAATATGATATCTATCTAGTGTGGTGTATGGAATATAGGACAAAAGGTGGTGGTATCTA
TTGATTGGTCATGTCACATAGGCTTGAGTTGGATAGCCAATTACTTTGATTTATCAGAAA
ATTCGCCCACTAGTTAATGTTGCAACTTATTGCATGTGAGGGCCCTGGACTTAAAGGTCC
CAATTTCGATGACTAATCGTGTTAGTTTATGAGACTAATTGAAAATTTTCTCCTTAGGCT
GTATCTTACATGTTATGTCCTATTGATCTGGCACCTTACTGCTGTAATGTCTCATAAAAA
ATAAGAATTTAAATTTGAGTTTTGATGCCTATTGTTACAATTATTAGGAGATTTGGAGTA
TCAGCCCTCAGTTAAAGTATGTATCTGTTTTGAATGTGATGAATTTGCTGATAGGGATAC
ATTTGATTGAATTTAGATACAGAAATAAATATCATCGAGTAAATATTCGAGCTGTAAAGA
TTTGGGCACACCAAATTCTGGAAGGTCTGGTTTATTTGCATGAACATGATCCGCCAGTGA
TTCATCGAGACCTGAAGTGTGATAACATATTTGTTAATGGTCATCTTGGACAAGTGAAGA
TTGGGGACCTGGGATTGGCAGCAATTCTTCGTGGATCACAGAGAGCACACAGTGTTATAG
GAACACCTGAGTTCATGGCACCAGAATTGTATGACGAGAACTATGATGAGCTTGTTGATG
TATATTCGTTTGGCATGTGCATGTTGGAGATGCTTACTGGTGAATATCCATATAGTGAAT
GTGTTAACCCTGCACAAATATACAAGAAAGTGATCTCTGGTAAGAGGCCAAGGGCATTTT
ATAAAGTTCAAGACTTGGATGCACAAAGGTTTATTAGGAAATGCTTGGAACCAGCATCAA
ATAGATCATCAGCTAAAGAACTAATGCTTGATCCGTTCCTCGTGATTGACGATGCTGATA
GTGAGTCAGTTACAATGATGCGACTTCAGAAGCCTATCTTGAATGATAAAATTGCTATCG
AGGACCTTCACTTGAATGAGGATGTTCCAAGGACTAATATGACCATCACGGGGAAGTTGA
ACCCTGAAGATGATACCATTTTTCTTAAAGTGCAGATTGCGGATAAAGAAGGTGGTGTTA
GGCATGTGTATTTCCCATTCGACACTGTGACTGACACCCCCACGGAGGTGGCAAACGAAA
TGGTGAAGGAATTAGAAATTACAGACTGGAAACCATGTGAAATCGCTAATATGATTGATG
GAGAAATATCTGGCCTAGTACCTCAGTGGAAGAAATGGAATCAGTTTGAATCCTCCGATT
ACCATGTTCTGAGCTATAAGGATGATGATAACGATCGCCATAATCCTTTCCAAGGTTTCT
CGTCTTCTTCATCTTCCCAAGTATCATTGTCAGGTCTGCTCTCCTCTCAAGTGATTGACA
CAAACACCAATGACCGGCGTTGGCTTCATGGTGATATGTTTGATGACACGAGCTCTCAAT
GCTCGTCACACTCTGCAAATTATTCCAACTTCAATTACTTCTCTGATGATGAGAATGATC
CTGTGACCACCTCTACAAGACAAAGTCAACCAGCTACTGCAATTAGTCACCACACTTCGC
GATTCTGCCCTGAGGAAAACTCAAGCACCGGACAGTCTTTGGCAAGAACGTGCTACAAGC
AATGCAAAGCTATGCTAGAATCAAAAGGAACTTCTTCCACCTCTAAAGGGAAAGGTAATG
ATGATACGCGTAGACTAACAAGGAACAAGTCCTTAGTTGATATGCGGAGTCAGTTGTTGC
ACAAGTCATTGGTGGAAGAAGTGCACAAGAGACGATTGTTCAAGACTGTTGGTGCTGTTG
AAAACATCGGGTTTCAACAACCTTACGAGGATTTGAAGAGGAGTCCTAGATCGATGAATT
GTACTAATTCGATGAGATTGTCGAGTGATGGTAAGGGACAAGGTCACAAACCAAGAAGAC
ATTGATTTCTCTTCTACAAAATATGTAATTTAAATAGTAAGGACGATACATATGGTAGTT
TTAAGCAGATGAGAGTTTGAATTAAGCAGCTGATGTAATTGTAAATGACAATAAAAGTGT
TTGTTCAAATTTTGTTCATTTGTTCCTTCAAGCAATGGAAGAATGCAATTTGTGCAAATA
TTACTCTTGG
