Microarray Probes on PGSC0003DMT400077646
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23620_PI426222305 |
JHI_St_60k_v1 |
GGAGAAAATGGGATATGACATTAAGGAGGAATTATTGGTGTTCTAAATTGGATGATGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077646
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077646 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G37130.1 |
+1 |
0.0 |
733 |
351/450 (78%) |
nitrate reductase 2 | chr1:14158617-14161652 FORWARD LENGTH=917 |
Transcript Sequence (1668 bp)
>PGSC0003DMT400077646 1668 pgsc_dm_v3.4
CGACAAGTCATGAAAATTCCTATTACGTAAGCAGATCTCATGACACTCGCCAGACCTCTT
ATTTTAATTTGACTTGATAGTGTTAGTGATGGATTGAGTAACTTGTTTTACAATTTTCTA
ACTTTATGTGATGGATGTTGTAATGTTCAGGGAATGATGAACAATTGTTGGTTTCGAGTG
AAGATGAATGTGTGCAAGCCTCACAAGGGAGAGATTGGTATAGTGTTTGAGCACCCGACC
CAACCTGGAAACCAATCAGGTGGATGGATGGCAAAGGAGAGACACTTGGAGATATCAGCA
GTGGCTCCTCCAACACTAAAGAAGAGTATTTCAACTCCTTTCATGAACACAGCTTCGAAG
ATGTATTCCATGTCTGAGGTGAGGAAGCACAACTCTTCAGACTCTGCTTGGATCATAGTC
CATGGACATATCTACGATGCCTCACGTTTCTTGAAAGACCATCCTGGTGGTGTTGACAGC
ATTCTCATCAATGCTGGAACTGATTGTACTGAGGAATTTGATGCAATTCATTCTGATAAG
GCTAAGAAACTATTGGAGGACTTTAGGATTGGTGAACTCATAACTACTGGTTACACGTCT
GATTCGTCTCCAAACACTTCTGTCCATGGATCCTCTTCCATTAGTAGCTTCTTAGCACCT
ATTAAGGAACTTGTTCAAACACCAACAAGGAGTGTAGCTCTCATCCCAAGGGAAAAAATC
CCTTGCAAACTCGTCGACAAGCAATCCATCTCCCATGATGTTAGAAAATTCAAATTTGCA
TTACCCTCTGAGGATCAAGTCTTAGGCTTACCTGTTGGCAAACACATTTTCCTCTGTGCC
ACAGTTGATGACAAACTCTGCATGCGTGCCTACACGCCTACTAGCACAGTCGATGAAGTA
GGGTTCTTCGAGTTGGTTGTCAAAATCTACTTCAAAGGTGTTCACCCTAAATTCCCTAAT
GGAGGTCAAATGTCACAACATCTTGATTCTCTCCCAATAGGTGCATTCCTCGACGTTAAA
GGTCCATTAGGTCACATTGAATATCAAGGCAAGGGTAATTTCTTAGTCCATGGTAAACAA
AAGTTTGCCAAGAAGTTAGCTATGATAGCTGGTGGAACAGGTATAACTCCTGTATATCAA
GTAATGCAATCAATTTTGAAAGATCCAGAAGACGACACAGAAATGTATGTGGTGTATGCA
AACAGAACAGAGGACGATATTTTGCTCAAAGAGGAACTCGATGCATGGGCAGAGCAAATC
CCAGATAGAGTTAAAGTTTGGTATGTCGTTCAAGAATCAATTACAGAAGGATGGAAGTAT
AGTACAGGATTTGTTACAGAAGCAATTCTCAGAGAACATATACCTCAACCATCTCATACA
ACATTGGCATTAGCATGTGGACCACCTCCTATGATACAATTTGCTATTAATCCAAACTTG
GAGAAAATGGGATATGACATTAAGGAGGAATTATTGGTGTTCTAAATTGGATGATGATCA
TATATTTCTGGTGGAATAAATTCCTTTTTGTTTTCATTTGTACATATTGTACTTCTTGTA
GTTCTTACATTTTAATTTTCTACTCAACTTTAGGTATAAAATGTTGTACTCTCTACTAGT
ATGTGTATGTCAAAATTAAGTTGTAATATTCATCATGGAATTATAGTA
