Microarray Probes on PGSC0003DMT400076408
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15970_PI426222305 |
JHI_St_60k_v1 |
GGTAATTCCTATGACTATGAAGAATCCTTGAGATATTATTGTTATCAGGAGGAAGCATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076408
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076408 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G28360.1 |
+1 |
4e-37 |
132 |
89/203 (44%) |
ERF domain protein 12 | chr1:9951934-9952503 FORWARD LENGTH=189 |
Transcript Sequence (787 bp)
>PGSC0003DMT400076408 787 pgsc_dm_v3.4
GCTTCCCAAATATACTCTTTTTAGCTCCCAAAACCCCCCGGGGACACACAACACAAAACA
AAACAACACAACACAACACAACACTCATACACTTTCTCTCTCTAAATTTCCCCCATTTCC
ATGGCTTCAACTCGTGAGGGTCACTACAGAGGAGTGAGAAAGCGTCCCTGGGGCCGTTAC
GCCGCAGAGATTCGCGACCCATGGAAGAAAACACGTGTTTGGTTAGGCACTTTCGACACT
CCCGAAGAAGCTGCACTCGCTTACGACGGCGCCGCCCGTTCACTCCGCGGTGCTAAAGCC
AAAACCAACTTCCCTCCTCCTCCTCCTCCTCCGCCGCCTTCTTCCGTTCCTCTTCCAATC
GACCTCAACCTTCCATCTGATCACCGGTGGACTTCGCCCTCCGGACGTAGACTCATGATT
GGGGAGTTTCTACAAGTAGGTCCGCCGCCGGAACTGAACTTGCCGGTCACCGGCGCCGCG
CCGGCGAAGGAAAATGACGGTGGAGCTGCGGCTATGTATTTTGGGATCGTGAGACGTGGG
TTGCCTATTGACTTGAACGAACCGCCGCCGTTGTGGATGTGAGGCGGCAGCGGATAATTA
ATGACTTGGTAAAATTACTTTTTTCGTTTTTTACATTTTTGTCATTCTCTCTATTTTCAA
GCTTGTGGGAGAAAGGTAATTCCTATGACTATGAAGAATCCTTGAGATATTATTGTTATC
AGGAGGAAGCATCATTATGTAAATACCTTTTTTATTTTAATGTTAATCCTAATTCTCTAT
CTTTTTG
