Microarray Probes on PGSC0003DMT400068330
Probe ID | Chip | Probe Sequence |
---|
CUST_47829_PI426222305 |
JHI_St_60k_v1 |
CTGGACGTGGAATTCTCACCACTAAACTACAATCACTCTCTGTGTTCATGATAATGATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400068330
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400068330 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G29780.1 |
+2 |
5e-07 |
48 |
31/112 (28%) |
ralf-like 27 | chr3:11671741-11672094 FORWARD LENGTH=117 |
Transcript Sequence (841 bp)
>PGSC0003DMT400068330 841 pgsc_dm_v3.4
TAATAATGCACGCATTATTAGGTGGGGACCCCCCTACCTAAAAAAGAGACCATTTATTAG
TGATCCGTGAACACCTTCATAATATTCATGAGTCAATAGTCAGCAATAATAGTGTGAGAT
TTCTAAAATGAGGAGCTTTACTTTCTTTTGCCTATCCATGGTGATGATAGCGAAGATTTT
GCTCTCTGCTTCTTCGGTGACACACGGGACGATGATCGTTGATAGGCAGTGGAACGGCAC
CGGAGAAATGGATGGTATTAATTGGCAGGTTAGTCTTGCAGGTGGTGGAAATTACTTGTC
TTTCAAAGTTATTAACGATAAGCCGCCGATCTGCAACGAGAAAGTGTACGGGAATTGCAT
AGGGGACAAGAAGCCTGGGCAACGGCCATGTACCTACTACAATAACTGCAAGCGTTCTCC
AGGTTAAAACTGAATCTATGAAGTTAAAGTGACTTTAGAGTGATTTCTCTACCTATAAAT
AGGGTTATCATTTACCCTTATAAGTGACACGAGAAGACATTTGAATAAAGATGATCTCTT
GTCTATATATCTTTTATATTACTTATGTTTTATAAGGAGCTAGGGGAGGGGTATTGTTAA
TTTCTGTTACTACATCTTATAGTGGCCAAAAAGAAATGTGTGTGTGGCTGCTGGACGTGG
AATTCTCACCACTAAACTACAATCACTCTCTGTGTTCATGATAATGATTATAAATTGATT
AAGTTATGTAAATGAACATAACCTGTGTGTATATACTTCCAAAATGGCAAGATTTACATA
TGTTCATATTATCTTTTTCCCAATTTATGTATTTCGAGAATTGAATTGAATTTTGATTTT
G