Microarray Probes on PGSC0003DMT400064256
Probe ID | Chip | Probe Sequence |
---|
CUST_3535_PI426222305 |
JHI_St_60k_v1 |
ATCAAAGGATCACCACATCCAAGGGGATATTACAAGTGTAGTAGTGTAAGAGGTTGTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064256
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064256 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G23320.1 |
+2 |
2e-66 |
218 |
159/335 (47%) |
WRKY DNA-binding protein 15 | chr2:9924998-9926154 FORWARD LENGTH=317 |
Transcript Sequence (1316 bp)
>PGSC0003DMT400064256 1316 pgsc_dm_v3.4
TTTACTTTATCACAACTTTCTTCTTCTTCTTTTTATGCTAATAAATACCCTCACCAAGGC
CATAACTTTGACTCTTTATTAAACTCTCTCATTTACATACTTCATTGATGTTTCTATTTT
CTGAAATCACTATACTTCTCAGTTGTCTAAATTAGCTATAATGGCTGTGGAGCTAATGAT
GGATTACAGAAACAATAGGAATAGTACTACTAATTGTATAAACTTCGTGGCGAAATTAGA
AGAAAAATCAGTTGTGCAAGAAGCTGCTTCTGGTCTTGAGAGTGTTGAGAAACTCATCAG
ATTATTATCACAGACTCAATCTCAACAAATTCAGCAGCGAAATAAGTCTCCAATGGAGAT
TGAAATGGTGGCTGATGCAGCTGTTACAAAGTTTAAGAAGGTAATTTCACTTCTAGATCG
AAACAGAACTGGTCATGCTAGATTCAGAAGAGCTCCTTTGGCTAGTGCTAATCCTTTGCC
TATGAATTCTAGTAAAGATTTTGTTGATACGAAAGTGTATTCTCCAACTCCGATCCAACA
AGTTCCTTTAATTAACTATGACCATTTTAACCCTCTGGTTCCAAAAACGATAAGCTTCTC
ATATTCACCGGAAATGTCTCGCACAAATTCGTTCAATATCTCATCGTTAACAGGGGAAAC
AGAGAGCAAACAACATTCTTCATCTAATTCAGCTTTCCAGATTACCAATCTTTCTTCTCA
AGTCTCTAATTCTGCCGGAAAGCCTCCATTGTCTTCTTCTTCACTGAAACGAAAGTGCAG
TTTATCGGAAAATGCCGTATCTGGGAAGTGCAGTGGATCCTCCGGCCGATGCCATTGTTC
CAAGAGAAGGAAGTTAAGGCTGAAGAGGGTAGTTCGAGTACCGGCAATAAGCATGAAACT
GTCAGATATCCCACCAGATGATTACTCATGGAGAAAATATGGACAGAAGCCAATCAAAGG
ATCACCACATCCAAGGGGATATTACAAGTGTAGTAGTGTAAGAGGTTGTCCAGCACGTAA
ACATGTTGAAAGAGCATTGGATGATCCAACTATGCTGATTGTTACATATGAAGGAGAACA
TAATCATTCACTTTCTGTTGCAGAAACAAGTAGTCTCATTTTAGAGTCTTCTTAGGAATC
AAAAATTGTGTAGCTTTCTTTAATCCCCTGAAAAGATGAAGGGTTTTCCAATCAATGTAA
ACTCTATCGTTGTTAATTAGATTAGTTGATCAGTCTGTTGAAGTAAATCAAGATCTGTCT
CAAATGAGATTAAGCATCGTAATTAAGTATTTTATTTATGCTAAACTGAATTGCTA