Microarray Probes on PGSC0003DMT400063242
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12797_PI426222305 |
JHI_St_60k_v1 |
AGCCAGAGGGCTTGAGTTTATCTTTACTGATCTTTAGCATATTTTCATCATTTGATCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063242
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063242 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G20970.1 |
+3 |
3e-23 |
96 |
67/217 (31%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:11215259-11216212 FORWARD LENGTH=190 |
Transcript Sequence (993 bp)
>PGSC0003DMT400063242 993 pgsc_dm_v3.4
GGAGAACGTATGCTTCAAACTTTACAAGATCAATCGATGATCGATTTATATCATATATCA
TAAATACAACAAATCAAATGGAAAACAACAACAACGTTGTTACTACTAGTTTAGAAAAGC
TAGACCGGAAAACACAAGAAAAGAACAGAAGAATTCAAATGAAGTATCTTTCTTCTAAGC
TCTTTTCTCTTATTCCTCCACACCACCACCACTACTCTACTAAGGTATGAACCCTATTTT
AGTAATTAGCTTTGATTCAAACTCTGAATTTATTTTTAAAAATTCATTAAATATATACAA
ATACTTTTCCTTGACTTGTAAGTGAAACAATATAATTTCAGGATATGGTGACGCAACAAG
ACCAGATTGATCAAGCCATTACTTACATTGAGAAATTGAAAGAAAGAGTAGATGTATTAA
AGAGAAGGAAGGATAAGATTATAGCACAAGGTACAAGTGATGATTCAAATAAATTCATGC
CTTCAACATCTTGTACTACTATAAAAATACCTATGATTGAAGTTAGAGAGTTGGGTTCAA
CTATAGAGGTCATTTTAGTTAGTTGCTTGCAAAAGAAGTTCACCATGCAAGAGGTTATAA
TCATCTTAGAGCAAGAAGGAGCTCAAGTTGTTACCGCTAATTTTTCAACAATTGGCAATA
AGGTTTACTATACGATCCATGCTCAGGTGAAAATTACGAGATTAGGGGTTGATGCATCAA
GGGTATATTCGAGATTGCAAAATCTGATTTGCTAATTTTTTAATTACTTGCCAGCAGAAA
AATAACTTAGAATATTGTATTATACTCATTTCTATTCTTTTGTTGGTTATTCAAGTTGGC
ATTCTTATTGTATTAGCAAAAAATTATCAAAATCAACAAAGGGTTATAGTAGAGTGATAA
TTAAGTGCTTCATCCTTAGCCAGAGGGCTTGAGTTTATCTTTACTGATCTTTAGCATATT
TTCATCATTTGATCTAGGAGAATTAATACGAAC
