Microarray Probes on PGSC0003DMT400062327
Probe ID | Chip | Probe Sequence |
---|
CUST_43003_PI426222305 |
JHI_St_60k_v1 |
GATGTGATGACATGGGTTGGTCAATATTGAATGTCAACTTGCTGTTTTGTTAGTTTTGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062327
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400062327 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G51910.1 |
+3 |
4e-64 |
214 |
144/336 (43%) |
TCP family transcription factor | chr5:21094704-21095585 REVERSE LENGTH=293 |
Transcript Sequence (1722 bp)
>PGSC0003DMT400062327 1722 pgsc_dm_v3.4
CTCCTTTCTTACTCACATACCACAGTTACAATACACCAGCGTTCCTATTTTCTTCTTCCT
TCTTGCCCCCAACAGCTCCCTCACACACCACCACAGCGCTAGTTTTTCTCCCCTGCAACT
TCTTTATTCCTTGGTCATTTTCTTATTCTTTCCATGTATGTATTTCATTTTAGCACCTCC
AACCAAAAGTTGAATCTTGTATAATGTATTACTCTGTATCCTGTGATATATTCCATACAA
GTGTTCGTGAAGAAGAAGAAGGTATTTTTCATAAGATTTCCAACCAATCGTACATTCTCT
TCTAGCACAGCTGAATTCATACTCCCAAGCTATCTGCTTCTGTGTTTGGATTTTTCTGCA
AAATGGCCAGTGTTGAGAACAACCAAAACATTGAACAGGAAGATGACGAGGTGAGCGACT
CGAAGATTGATCCGTTACTTGGCGATTCTCATGAATACACAATTGCAGCGGTAGGGAATG
TCACGGATGCGGAAGGGGTGGACCCGTCTCCGGCGCCGTCAACCGATATGGTGCTGTTGT
TAAAGGAAGAACCGGAGGAAAACGATTTGCGAGTTTCTACGTCAGTTGGGATGAATATGC
AATTGCAAAAGGTAGAGAAACAGCCGGTGAAAAGATCTTCAAAGGACCGGCACACGAAAG
TCGAAGGCCGTGGTCGGCGAATCCGTATGCCGGCAGCTTGTGCTGCTAGAATCTTCCAAT
TAACACGGGAACTAGGTCATAAATCGGAAGGTGAAACTATAAGGTGGCTTCTAGAACGCG
CCGAGCCAGCAATCATTGCCGCTACTGGAACGGGTACGGTTCCGGCCATCGCCGTATCAG
TAAACGGAACGCTGAAAATACCGACGACTTCACCGGCGGCAAATAACGAGGGAGAAAGCT
CGACGAAGAGAAGGAAAAGGGCTGCAAATAGCGAGTTTTATGAGGTACATGAGGCGTCAA
GTTTTGCACCCGTGGCTCCCATTGCCCCACAAGGTCTTGTTCCTGTTTGGCCAGTGGGCT
CTGGGAATGGACTTGTACCCACCACTGCATTTACCGGTGGGGCAACTTTCTATATGCTGC
CGCCAGGCACTAATACAACAGTTGGGGCTCAGTTGTGGGCCACTCCAATATTTAACGTAC
CTGGAAGAACTATTTCAAATTTTGTATCTGCAATGCAACCTGGTATGGGTTATGCAGCAG
GAGGGGTCTCTTCTGTTGCTGCTGCTAATGAGGTTCATTTGAGCAGCAGCTTTTGTGTGT
CAAAAAGTGATGGAAATGGAGACAAGTTAGGTAATGTTGCTTCAGCCATGGCTCCAAGTT
CGAGTTCTACTGGTTCCACAACTACAAGTACTACACAGATGCTTAGGGATTTTTCATTGG
AGATTTATGACAAGAGAGAGCTTCAGTTTATGGTTGGTTCTGGTTCCAGTGAAAATGATC
AAACTTCCTCTTCTAAATCCTGATTAGGGTTCTAGACCCCATAAAACTTTTGTTTTTTTT
AATGTCTTCTGGATAAGCATCTAGCTGTAGTTTTTCAAAAGATTTTTTTTTTTTTGGGTC
TAGTTCGTAGCTGCTTTAACATTTTGCTTGTAAATTAGGTTAGAAAAAGCAAATGGAATT
AGAATCTAATTCCTCCGGTAGGAAAGGAGGTTGCTCTGCTGTGATGTGATGACATGGGTT
GGTCAATATTGAATGTCAACTTGCTGTTTTGTTAGTTTTGGG