Microarray Probes on PGSC0003DMT400059885

Probe IDChipProbe Sequence
CUST_52172_PI426222305 JHI_St_60k_v1 CATGGTGAAGTAGTGTTGCATGATGATTTGTTTGATAGTGCTAGAATGTGGTCCTTTTGA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059885

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400059885 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G74930.1 +1 1e-20 86 56/98 (57%) Integrase-type DNA-binding superfamily protein | chr1:28144239-28144826 FORWARD LENGTH=195

Transcript Sequence (483 bp)

>PGSC0003DMT400059885 483 pgsc_dm_v3.4
ATGGTGCGGCCTAAAGTAAGCAAAGAGAAAAAAGTGAAAGGGGATCGTTACAAGGGTGTG
CGTATGAGAAAATGGGGAAAATGGGTAGCTGAAGTACGGCAACCGAAAAGCCGTGACAGA
ATATGGTTAGGCTCTTACGATACGGCGGAAGAAGCGGCTAGAGCTTATGATGCAGCGGTG
GTTTGCTTGCGTGGATCGTCCGCGATGATTAATTTCCCGGACGATCCACCGGTTATTTCG
TGTGATGGTGATCATAAGTTGTTGTCACCTTCGGAAATTCAAGTTGAGGCATCGAGACAT
GCACGTAGTACTAGAGAAGAGTCTGCTGCAGCTGCTGATGATGCCGTAGACCACGGCAGA
TCAGCAGCTGTGGAGAGTGTGTTTTTTAGAGATGATTTGGAGTTTGAATGTTCTTCTTTA
GATCATGGTGAAGTAGTGTTGCATGATGATTTGTTTGATAGTGCTAGAATGTGGTCCTTT
TGA