Microarray Probes on PGSC0003DMT400058934
Probe ID | Chip | Probe Sequence |
---|
CUST_9333_PI426222305 |
JHI_St_60k_v1 |
GGTGGACTAGTGAGTCTTCTCTGCATATATGTAATATCAAGATGTATGTTTGTATCTACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058934
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058934 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G17420.1 |
+1 |
0.0 |
830 |
387/504 (77%) |
lipoxygenase 3 | chr1:5977512-5981384 FORWARD LENGTH=919 |
Transcript Sequence (1725 bp)
>PGSC0003DMT400058934 1725 pgsc_dm_v3.4
GTGGTGAATGCTTAATTAACAAATGTCAATATTGTGTACATTGCAGAGGACAAATTTGCC
TGGTTACGAGATGATGAATTTGCTCGACAAGCAATAGCAGGAGTGAACCCGGTATCCATC
GAAAAACTTCAGGTTTTTCCACCAGTAAGCAAGCTTAATCCTGAAATCTATGGCCCTCAA
GAATCCGCCCTCAAGGAGGCGCACATTCTTGGTCATCTAAATGGCATGACTGTTCAAGAG
GCTTTGGATGCAAATAAGCTTTTCATTGTGGATCATCATGATGTATACCTTCCATTTCTC
GATCGGATTAATGCACTTGATGGCCGCAAAGCATATGCAACACGCACCATTTTTTTCTTG
TCTGATGTTGGCACCCTTAAGCCCATTGCCATTGAACTTAGCCTCCCCCAAACTGGTCCA
AGTTCGCGATCCAAACGTGTTGTCACACCACCTGTTTGTGCCACTGGTAACTGGACGTGG
CAGATCGCTAAAGCACACGTCTGTGCTAATGATGCTGGAGTTCACCAACTCGTCAACCAC
TGGTTGCGTACACATGCATGCTTGGAACCATTTATATTGGCAGCACATAGGCAATTAAGC
GCGATGCATCCGATTTATAAGCTTTTGGATCCACATATGAGATACACTCTAGAAATTAAC
GGCTTGGCTCGCCAGAGCTTGCTCAATGCTGATGGTGTCATCGAGGCTTGCTTTACTCCT
GGTCGCTACTGCATGGAGATCAGTGCTGCTGCCTACAAGAATTGGCGCTTCGATTTAGAA
GGCCTTCCAGCTGACCTCATCCGAAGAGGGATAGCAGTACCGGACTCAACACAACCTCAT
GGGCTGAAACTTCTAATTGAGGACTATCCTTATGCTGCAGATGGGCTTATGATATGGGGC
GCAATCGAGGGCTGGGTTCGTGATTACGTAAACCAGTACTACCCATCCTCGGCCCAAGTT
TGCAGTGACAGGGAGCTGCAAGCTTGGTATGCCGAGACTATTAATGTGGGCCACGTTGAG
CTCCGCAATGAGGATTGGTGGCCCACATTAGCTGCTCCAGAGGACCTCATTTCCATCCTC
ACCACCCTCATCTGGCTGGCTTCAGCGCAACACGCTGCACTGAATTTCGGGCAGTACCCT
TACGGTGGCTACGTCCCAAACCGGCCACCACTCATGCGTCGATTAATCCCTGACGAGAAC
GATCCCGAGTACGCGGTGTTCCTAGCTGATCCACAAAAATATTTCTTCTCAGCTTTACCA
AGTTTGTTACAAGCAACAAAGTTCATGGCCGTGGTTGACACATTATCGACACATTCCCCG
GACGAAGAATACTTGGGGGAAAGACATCAACCGTCTACTTGGACCGGAGATGCAGAGATT
GTTGAAGCGTTCTACAAATTTTCCGCGGAAATAGGGAGAATTGAGAAGGAGATAGATGAA
AGAAATGCCGATACGAAACTAAAAAATAGGTGTGGTGCTGGTGTGTTACCATATGAACTA
TTGGCACCAAGTTCAGGCCCTGGAGTAACATGTAGAGGTGTTCCAAATAGTGTATCAATA
TGAGTAATTATAAGTACATATATATAACCAATGTTTATAAAGTCCATAAATAGGGTGGAC
TAGTGAGTCTTCTCTGCATATATGTAATATCAAGATGTATGTTTGTATCTACAGCTAGAT
TTTTGTAAGAACATTAATTAAATTAAATAATTAGCTACTAATACT