Microarray Probes on PGSC0003DMT400058477
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42881_PI426222305 |
JHI_St_60k_v1 |
GGAGATTGTAATCTTTTCTAATTTGCCCTTTCTTGAGGATGTTAGGGTGGTGACTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058477
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058477 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G50420.1 |
+3 |
0.0 |
585 |
313/483 (65%) |
scarecrow-like 3 | chr1:18678177-18679625 REVERSE LENGTH=482 |
Transcript Sequence (2451 bp)
>PGSC0003DMT400058477 2451 pgsc_dm_v3.4
CAAAACGCCAAAAACAAAAATATTACCGACAAAAATTAACCCCATGCTTTGTCAACAACA
AAACAAGACTATGATCTCTCACAAACACACCTTTTTAATTCAAACCAATTCATCTCTCCC
TATATCTTCATTTCCAAAAAAAAAATAGGTTAAGAACCCAGAAAAATCTTGAACCCAGCA
AGAACTTTTATTTATTTATTTGGGAAAGTTCTTGTTATGATTTCTGTGGGTATTTGATGA
ATTGAATAACCCAGAAAGGAATTTCTAGTTCTTTGTCTTGTTGGTGAGTTCTTGCCAAAT
TTGTGCTTTTTGAGTACTTGTGCTCTGTTTTCTGGTGATTCTTGAACTTTGTTCTAAGAA
CTTATTTTGGGAGTTCTTGGTTTGATTTTTATGGGTTTTTGATGAATTGAGTTGCCCAGA
AAGGAATTCCTGGTTCTTTGTGTTGTTTGTGAGTTTTTGCCAAATTTGTGTTTTTTGGGT
ACTTATGCTCTGTTTTTTTCTTCTTCCTGAACTGGTGATTCTTGAACTTACTTTGGGAGT
TCTTGTGTTGCTTTTTGTGGGTTTTTGATGAATTGAGTTACCCAGAAAGGAATTCTTGGT
TCTTTGTGTTGTTTATAAGTTCTTGCCAAATTTGTCATTTTGGGAACTTGTGCTCTGTTT
TTTACTCATTCTTGCCAAAAATTTGTCTTTTTTTATGTTTCTTGGCATTTGTGTCACCAA
GTTTTGATTTTTTGGGAAATTTTTGGGTTTTGATTTCAAGAATCACAATGTTACAAGATG
ATGGTTCATCATCAGTGACTTCATCATCACCACTTCAAAATTTCCCAATGATGTCACTTT
CACCTAATTTTGGTGGCTCACCATATCAATGGCTTAAAGATTTGAAATCTGAGGATAGAG
GTTTATATCTAATTCACCTTTTGCTTACTTGTGCTAATCATGTAGCTATTGGAAATCTTG
AAAATGCTAACATAGCACTTGATCAAATTTCCCATCTTGCATCTCCTAATGGAGATACAA
TGCAGCGAATCGCCTCGTATTTCGCTGAATCACTTGCTGATAGGATTTTGAGATCTTGGA
ATGGGATTTACAAGGCGTTAAATTCGACAAAGTTGAGGGTTGTATCTGAGGATATTCTTG
TGAAGAAGATGTTTTTTGAGTACTTTCCGTTCTTGAAAGTAGCTTCTGTGATCGCTAATC
AAGCGATCATAGAAGCTATGGAAGGTGAAAAAATGGTTCATATAGTTGATCTTAATGCTT
CCGAACCCTTGCAGTGGCGTGCGCTCCTCCAGGATTTGAGCGCACGCCCTGAAGGACCCC
CGCATTTGAGGATTACGGGGGTCCATCAACAAAAGCAAGTGTTGGAACAAATAGCACATG
TTCTAACAGAAGAAGCTGAAAAGCTTGATATCCCTTTTCAGTTTCATCAAGTAGTTAGTA
AATTGGAGAATCTTGATATCGAAAAACTACGAGTTAAAACCGGAGAGGCGTTAGCTATTA
GTTCAGTTATGCAATTGCATACTCTTCTTGCACATGATGATGAACCCCAAAAGAAATCCC
CTTTGGGTTTTAAGCATTTGAATGGACTTCACTTGCAAAGGGCAATACTAAACCAAAACA
CTTTAGGGGATTTGCTCGAAAAAGAGACGACTACTAATGTTTTTAGTCCAGGCAATGAAT
CAGCATCCTCATCTCCGCTATCTTCAACTGCATCAACGAAGATGGATGGATTCCTCCACG
CATTGTGGGGGTTGTCACCAAAGGTCATGGTGGTTACAGAACAAGACTCGAATCATAACG
GTACAACCCTTATGGAAAGGCTATCCGAGTCGTTGTATTTTTATGCTGCATTGTTTGATT
GTCTCGAATTCACACTACAGAGAACATCGTTAGAGAGGTTAAAGGTTGAGAAAATGCTGT
TTGGAGAGGAGATTAAGAACATTGTAGCGTGTGAGGGAGGTGAACGGAAGGAGAGACACG
AAAAGTTGGATAAATGGTTTCAAAGATTCGATGGAGCTGGTTTCGCGAACGTGCCTTTGA
GTTATTACGCTATGTTGCAGGCAAGGAGATTGTTGCAGAGTTATAGTTGTGAAGGATACA
AGATTAAAGAGGAGAACGGTAGCGTGGTGATCTGCTGGCATGATCGCGCGCTTTTCGCAG
TTTCAGCTTGGAGATGTAGGAGGTGAAAACTTAGACAAGTTTACAATTAACAAAAGTTGA
ACTCCGAAAAACACGTTTGGTTCATCTTCCTATTTTCCTTTTGTAATGCACTTTGTAGGA
AGGTACTTTTTGTGAAGTGAAAACTCAACTCTCATGGAGATTGTAATCTTTTCTAATTTG
CCCTTTCTTGAGGATGTTAGGGTGGTGACTTTTTTTTCATTTTTTTATATAAAGTTCATA
ATTTTATGTATGATTTTAGTTCCATAAGAAGACCTAAAGAATTACTCAAAT
