Microarray Probes on PGSC0003DMT400058260
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33489_PI426222305 |
JHI_St_60k_v1 |
TTGTCGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTAGCTCCGGCAAGTATCTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058260
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058260 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G59710.1 |
+2 |
4e-111 |
340 |
183/297 (62%) |
Protein of unknown function (DUF569) | chr1:21938623-21939673 FORWARD LENGTH=300 |
Transcript Sequence (2010 bp)
>PGSC0003DMT400058260 2010 pgsc_dm_v3.4
CAAAAAAAAATCACTACAATTATTTAATTCTTCTATATTTGATTCCTATACCCTTTCCTT
AATAAATCCATTATTAATATTCCTCTTCAAATTTTTTTTCCTTAATTCCATATATTCATC
ACTAGTTACAAAAAAATTATTAATGGATTTTTTCTACAAAGCCAAAGCTGTAAAATTAAA
AAGTCATCTAGACAAGTACCTTGTAGCCGATGATGATCAAGAAAATATCCGACAAAGCCG
AAACGGCTCATCAAGAAAAGCCCGGTGGCTTGTTGAGCTTGTCGAAGCCGAAAACAGCCA
CTTTATACGGCTTAAAAGTAGCTCCGGCAAGTATCTCACGGCTTCCGACGAGCCGTTTCT
TCTTGGCATGACCGGAAAAAAGGTATTTCAAACTTTGCCTGAAAAGATGAAGGACTTGAG
AATCGAATGGGAAGTAATAAGGGATGGATTTCAAGTAAAATTAAGGGGTTTTGGAGGAAA
ATATTTACGTGCAAATGGAGGAATGCCACCATGGAGAAATAAAGTGACACATGATAATCC
TTATAGTGGTAGCACACTAAATTGGATTTTGTGGAATGTTGAACCTATCGATGTGCCCGA
AAATGAATCGTTGACTGATTATTTAACTATGGTTTCAAGTTTTTCATCAGTTTCTGATGA
ACTTTTAAGTTTGGATTTAGGATCTCCAACTTCTGTACATTCAAGTTTTTCTTTCTCACC
TAGGAGTGCTAAGATTTCTTTACCAAAAAGATCAGCAATGGAGCTATTTCACAAAGCAAA
AGCTGTTCGTTTACAGAGTCACCATGAAAAGTACTTAACAGCTGAAGAAGATGAAGAGTC
AGTAACTCAAGATCGTAACGGAGCTTCAAAAAACGCGAAATGGACAGTTGAATTTGTTGA
AAAAACCGAAAACGTTATTCGATTAAAGAGCTGTTATGGGAAATATTTAACAGCTTCGAA
TCAGCCATTTCTTCTGGGTATGACTGGTAGAAAAGTTCTTCAAACTTTGCCTAATCGACT
TGATTCTTCGATTGAATGGGAACCCATTAGAGAAGGACATCAAGTTAAGCTAAGGACGAG
ATATGGGCAGTTTTTGAGGGGAAATGGGGGTCTTCCTCCATGGAGAAATTCCGTTACTCA
TGATATTCCTCATCGTTCGAAAACTCAAGATTGGGTTCTTTGGGATGTTCATGTTGTTGA
AATTTTGGCGCATTCAACGGCGGAGACGGCGGCGGCGATGGCGGAGACGACGTTGGTGGG
TGGTAATTCTGATTCGTTTGCTTCTGAATCGAGTTCTGCTACTACTACTGGTTCATCAAA
ATCTTACAGCTTTTCCAGACAAGAGTCAAGTGATTCATTGATTAGTTCGCCGCCTAAGTT
GGTAGATGGAAGGCATATATATTATCACATTATGGATGAATTTGGAGAAATTGACGAAGG
AACAGAGGGACTTTGCATAACTTTCAAGGGAAATAGTGTTGATGATCTAAAGAAGAGATT
GGAGGAGGAAACTGGGCTCGAGGATATTACTGTGTGTACTCGGAGTGCTTTGAATGGGAA
GCTTTATCCTCTCCGTTTGCAGCTTCCTCCAAACAACGCAAATATGAACGTTATTATTTT
GCCATCTTCATCTAAAGAGGCTAGAGATATTGCATAACCAAGAATGCCATTGTAGCCGAA
CTCGTGGAGCACTTAACGCGGATTGTTGCAGTAGATGGATTTTTGTATCAGTAAAAGATG
AACGTCGTGTAAATGTATATCTCCATTGTTTTTTAAGCATTTGTGCATAAGGTTTTGAGT
ATTGAGAGAGATATAATAGTTACTAGAATATCTGCTCTTGATGTTAATATCATCATACAC
TTCCACAGAATAATTGAAAAAATTGAAATCTGGTGGAATTTTTAGTTCATATTACTCAGG
AGGAGATTTCTTCAATTGTTTTTTTTTTGTGGCAAGAAATTTTCGATAGCGGCTACCGTT
TGCAGTAACGTCTACATATTTCGATATTGG
