Microarray Probes on PGSC0003DMT400055405

Probe IDChipProbe Sequence
CUST_41628_PI426222305 JHI_St_60k_v1 ATTGGAAAGTTGGGGAAAATCAGTGTAAAATAGTCATCGGAATTACAGTTTAGGCATGTA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055405

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Source Transcript PGSC0003DMT400055405 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G75810.1 +2 2e-31 115 57/109 (52%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28461747-28462124 FORWARD LENGTH=125

Transcript Sequence (767 bp)

>PGSC0003DMT400055405 767 pgsc_dm_v3.4
TGAAAATAAAAAGAAGATAAGCTCAGAACCCATAGCATTATCTTACACCCCCCTACCCCT
ACCCCAACCCCAAATCGAAAATTTCGTAATTCTCACTCCATACCATAATCCCTTTTTAAA
ACCCTTTATTATCAGTTCACTACCTGCTGCAGACTCAAAATTTACCAAATTTCAACTTAA
TTTTGATCTTAGAAGACCAATAATTATGGCGATTTCGGATACTGTAGTGGGGAATTTAAC
GACGTTGTACCTGTTAGTGATAGCGGCAATGAAGGCGTACGGATTGATGACTGGACGGAG
CTACGGCGGAGTTTTTGTACTGATTGTATCAACAGCTGTTGTAGGAAGTGTATTGATTTT
GAGTTTGACGTGGGATGTGTCACGTAAGGTTACTAGGTGTGCTTTTACACGCGATCGTTA
TCTTACTCAGAATCGGAATCAGCCACGTCATCATTCCGATGAGTTGTGTAGAGGTGGTAT
ATGTTGGCACGGCGTTGCTGTTAGATCTCCGGCGTCGCAGTTTCGGTTCCGGCTTCCTCA
GCACCACCCTCGCTAGCGGTTAAGAAAAGTGAAAATCGAGTGATTTTAATTCACTGTAAG
TATGTAAATTAGTTTTGGATCGAATTTTTCTATCTGTTTTTGGCTTTTTGACGATTGGAA
AGTTGGGGAAAATCAGTGTAAAATAGTCATCGGAATTACAGTTTAGGCATGTAAATAAAA
ATATATGTGCAATCAGTTTTTTCTCGCTACGAGCTTTCACCTTTTTG