Microarray Probes on PGSC0003DMT400055111
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18268_PI426222305 |
JHI_St_60k_v1 |
TGGATTGAGCTCAATCATACCTCACCAAATTCCTATATTGTTTTATCAGCAGATGCTCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055111
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055111 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52820.1 |
+1 |
7e-28 |
79 |
42/107 (39%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317 |
Transcript Sequence (775 bp)
>PGSC0003DMT400055111 775 pgsc_dm_v3.4
GCAGCAATGTGGCAAAGTCCTACTTCAAGCAACTTATGGAATTGAATGGCATGGTGGAAA
AGATGGTTTTGGAGAGTCTTGGGCTAAAAAATTACATTGATGAATTCTTGAATTCCAATG
TTTATATGTCAAGATTTACTAATTACAAGGTAATTAAAGGTGAAAATGAGAATAAATCAG
GATTACCTTCCCACACAGATAGTTCCTACTTGACCATAATTAAACAAAATCAAAATGGAT
TGCAAGTTCTTCTACAAAAATGGAGAGTGGATTGAGCTCAATCATACCTCACCAAATTCC
TATATTGTTTTATCAGCAGATGCTCTTATGGCATGGACAAATGATAGATTGACATCTGCT
CAACATAGGGTTGTAACAACAGGAGACAAAGATAGATTCTCTGTTCAATTATTTTCCCTC
GTAAATCCAGATTATACTTTGAAGGTCCCAAAAGAATTAGTGGATGAAGAACACCCTTTA
ATGTACAAGCCTTTTAAGATGCCTGAATATAATAAATATCTTATGTTAGGTGCTAAAAAT
GGATTGGGTGTCAAGAATTATTGTGGTCTTTAAAAATTTAGTAGCTATGAAAATTTATTT
ATGTATTGTTTTGATGAATAAAATGTATCAGATGGCTGGTTGAATACTTTGAATTTATAT
TTGGATGGTTATTACGTATGATTGCGTAAAGTATTGTATTGTATTTTATTTTGTTGTGTT
GTTTTGTATTGTGTTGCGTTGTATATATTGTTTTGATGAATAAAATATATGAGTG
