Microarray Probes on PGSC0003DMT400054481
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24567_PI426222305 |
JHI_St_60k_v1 |
GAGATCTCATTGATCCTAATGTCTAATTTGATATTCTCATGTAATCGCGCTTTCACTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054481
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054481 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G31330.1 |
+1 |
5e-98 |
291 |
159/229 (69%) |
photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221 |
Transcript Sequence (906 bp)
>PGSC0003DMT400054481 906 pgsc_dm_v3.4
ATAGTTTCATTCTCCACACTTCAATCTCCTTCTACCATTTTTTCTTGTAGTACATTAAAA
ATTAGAAAGAACACCATGTCTCTTACTATTCCAACAAACCTTTCAAAACCCATTTCAACG
TCTAAGTTTGGGTCTCAATTTACCACAAAACCAAGAACTTCAGCCATTGTGTGTTCTTCA
AACCAAACCCCTGTTTCTAATTCAACAGAGGAAAGTTCATCTTCATTAAAGGCATTCTCT
GCAGCACTTGCTTTGTCTTCTATTCTGTTGTCAGCACCAGTTCTTCCAGCTTCTGCTGAT
ATCTCTGGGCTTACACCTTGCAAGGATTCAAAACAGTTTGCTAAAAGGGAGAAGCAACAG
ATCAAGAAACTTGAGAGTTCTTTGAAACTTTATGCACCTGATAGCGCCCCTGCACTTGCT
ATTAATGCCACTATTGAAAAAACTAAACGCAGGTTCGACAACTATGGTAAACAAGGATTG
TTGTGTGGATCAGATGGACTGCCACACTTGATTGTGAGTGGTGACCAAAGGCACTGGGGT
GAGTTCATCACACCAGGGATCCTCTTCTTGTACATTGCTGGATGGATTGGATGGGTAGGA
AGGAGCTACTTGATTGCAGTAAGAGATGATAAGAAACCAACAATGAAAGAAATTATAATC
GACGTTCCGTTGGCTAATAGGCTCGTTTGGAGAGGCTTCATCTGGCCTGTTGCTGCTTAC
AGAGAGTACTTGAATGGAGATCTCATTGATCCTAATGTCTAATTTGATATTCTCATGTAA
TCGCGCTTTCACTTGTTTATATTATGAAAAAACATTGAGAATTTCATATATACTATGTGT
AGATCTTGTGGTGGATGATTGTTAATTAGTTCTATATGTTATGATGTTAAGATTGTAAGT
ATCAAT
