Microarray Probes on PGSC0003DMT400053152
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29260_PI426222305 |
JHI_St_60k_v1 |
GTATATGCATGAACCAAAAGGGAGAGACTTTGTATGTGTCTTGTTGATTTCTTAGCTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053152
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053152 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78080.1 |
+3 |
7e-49 |
175 |
168/382 (44%) |
related to AP2 4 | chr1:29364790-29365794 FORWARD LENGTH=334 |
Transcript Sequence (1800 bp)
>PGSC0003DMT400053152 1800 pgsc_dm_v3.4
CAACATTTCTCAGAGTGAAAAAAAATCAGTGAGGCTACCTAAAATATTAAGTGTGTATTT
ACATTTTCGTTTCCCCCTCTCTAACATCCCGCTTCTTTAGATCCCTTTCTGTTGTCGTCT
GTCTTTCAAAAGAGATTTTCAATTTCAAAATCTTTGAGAAATTTTATAGAAAAATCAAAC
TCCCTTTTGGGTGTTTTATTTTTGAAAGCCAGGTGATCCAGAACAGAGATCAAGGTTCTC
TTTTTAAAAAAAAATTGTTTTCTTTGTCCAAACAACCAGAAGGGTCTGTTTTTGAATCCC
TGAGGTTGGTTTTTGGTTCTTTGATTTGTAGAAAGCTTGTTAACTCTTTTTTTTATTTTT
ATTTTATAAATCTCTACCTGTTCTGTAGCTTTGATATTAGAAACAGGTAATTTTTGTGTG
TTTTGATATTAACCATGGCAGCAGCTATAGATATATACAGCAGCAGTAACTTCTCAGATC
CTTTAACAGAAGAACTTATGAAAGCACTTGAACCTTTTATGAAAGGTGCTTCTTGTTCTT
CTTTTTCTTCATCTTCACCTTCTTCTTCTTCTTCTTCTTCTTTCTATACTTTTGGTGAGC
CTAATTTGTATACTGATTTCTGTGCAATCCCATCAACGGCTACCCAAATGTTTTCTCAAG
GGTATTCGTGTTTTAACAATATGGGTGTAGCTGAAACAGGTTCAATTGGGCTTAACCATC
TAACCCCTTCTCAGATATTGCAAATCCAAGCTCAGATCCAATTCCAGAATCAACAGCAAC
TACTACAACTGCATCAACAACAACAGAGCTTAGGTTTGTTAACACCTACTTCAACATATT
CTAAGAATCTGAATTCTACGAACTTTCTTGGTATGAAACCAGTCCCGATGAAGCAAACTG
GTGGTGCTTCTTCACAGAAGGCTACTAAGCTTTATCGTGGAGTTAGACAACGCCATTGGG
GTAAATGGGTTGCTGAAATTAGACTTCCTAAGAACAGAACCAGGCTTTGGTTAGGCACTT
TTGATACAGCTGAAGAAGCTGCTTTGGCTTATGACAAAGCTGCTTATAAGCTAAGAGGAG
AGTTTGCTAGACTTAATTTTCCACATCTAAGACATCAATTAAATAATGAATTCTCGCCTT
TACATTCCTCCGTTGATGCTAAACTTCAAGCCATTTGCCAAAGCTTGGCTAATCCCAAAT
CAGATGACTTGTGTTCTAAATCTAATTCCAAGCCAAGAAAGTCCAAAACCGCAGCAGCAG
CAGTTCCAGTGGATTCAAATTCAGCTCAAGAATCTTCATCAAAGTCCGAAATCACCATAG
ATGATTCATTGAAAGGAGAATTCAGCTATCCAGAAAATGCTAATATCAAGATTGAGGCAT
CATCATCATCCCCTGCACCATCTGAGGAATCATCATCTTCGCCTGAGTCTGATATTACTT
TCTTGGATTTCGCTGAACCACCATCTTTCGATGAATCAGAAAATTTCTTCTTACCCAAGT
ACCCTTCAGTGGAGATTGATTGGGCAGCTCTTTGTAACTTATTGTAGTATTACTTGTTTT
TTTTTTTAGAAATATATCATGTATGGCCTCCTGCAATGGTGTTTTTGACATTTGCAGAGG
TTGGTCTAGTAGTTAATAGAGTCATGTGAGTATGTAATAGTAAGGTCACTCACTCTCCAT
CTTGTTCATGCTGTGGTTTTTGTATATGCATGAACCAAAAGGGAGAGACTTTGTATGTGT
CTTGTTGATTTCTTAGCTTAATATAATCATATCGAATGTTTAGTATGTTTCTAATCTAAG
