Microarray Probes on PGSC0003DMT400049193
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20005_PI426222305 |
JHI_St_60k_v1 |
AGAACAAAGGGTCCTTGTGGAAAATCTCAAGTTGAATCACTAAAATCGCCAAGATAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049193
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400049193 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55970.1 |
+1 |
8e-84 |
256 |
124/186 (67%) |
jasmonate-regulated gene 21 | chr3:20766970-20769264 REVERSE LENGTH=363 |
Transcript Sequence (649 bp)
>PGSC0003DMT400049193 649 pgsc_dm_v3.4
GAAGTAATGAGATTATGTAAAAGATTAACTAAAATCTTATCGATAAACCTTGGATTAAAT
GAAGATTATCTACACACAAAATTTGGTGGAGACAATGAAAGAGGTGCATGTTTAAGGGTT
AATTTTTACCCAAAATGTCCCCAGCCTGACCTAACACTTGGACTCTCTCCCCACTCTGAT
CCTGGTGGCATGACCCTTCTCCTCCCTGACACCGACGTCACCGGCCTCCAAGTCCGTCGT
GGTGATGACTGGATAACAGTTAAACCGGTTCCTAATGCCTTCATCGTCAACATGGGAGAT
CAAATTCAGGTATTAAGCAACGCAATATACAAGAGCATAGAGCATCGTGTAATCGTTAAT
TCTGCGAAAGAACGTGCTTCTTTAGCGTTCTTCTACAATCCAGGAGGTGATATTCTCATT
AAACCTGCAGATGAACTTGTGACGGAGGATTGGCCGGCGTTATATTTACCGATGACGTTC
AACGAATATCGAGCTTTCATTAGAACAAAGGGTCCTTGTGGAAAATCTCAAGTTGAATCA
CTAAAATCGCCAAGATAAATAATTACACTATCTTTTTTTATTTTAAAGTATTGCATAATT
TTAATTTGATTTTTCCATCATGTCATGTCTATTGTATTTTTGCTAAATT
