Microarray Probes on PGSC0003DMT400049096

Probe IDChipProbe Sequence
CUST_52484_PI426222305 JHI_St_60k_v1 GCCAGTTAGCATCACAATCTGTATTGTCTTGTGTATATGTGTAATCTATAGGTTATGGAT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400049096

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400049096 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G47240.1 +2 5e-115 347 189/282 (67%) nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369

Transcript Sequence (1454 bp)

>PGSC0003DMT400049096 1454 pgsc_dm_v3.4
GAGTGATAACATTATCCCTTAGCAAATGCTTATTTTTAGTCGGGAAAATTATGGAGAATA
GCAAACATTTAGCCTATATTAGGTAATATCTTATGATCTCTGAGCAAGGAAGCATGAACT
CGAAGTAGAACAATCGATAATAAGGCAATACAAAATGCATCATTAGCTTATAAAGAATGA
TGTCCTGTTTCTAATGCAGTCAATAAGAAGAATATTATCTATCAATCTACAAGTTATTAG
ATAACGCCACTAATGCTACTAAATGAGAAACGTTGCTGTTTGTATCTCAAAATGAAGTTC
GAATTTTTGTAAATTTTCTGTTTTAACTTCAGGGCTGTTAACAAAGGCTTCTTATTCAAG
CACTTCTTATGATGCTACAAGATCAGTTAGCAAGAATAATTTCTTAGAGGACACTTTCTC
TTATAAGATAAACGGTACAAACCATACAAGTTTGTATTTTCGAGATAAATGGGTGCTTGA
TGCCTCTGACGATGAATATGGAGGAGTACTCGTCAACGCAGAAAGACTACCATCTGATCC
CGACAAATTTACCTTTGTGCTTCGTGCATCTCTCTCTCATTGGAAAGTGAAGGGGAAGAA
GGGAGTTTGGCTTAAGCTACCACTAGAAAAATGTGATCTAGTTCCTGTTGCAGTAAAGGA
AGGATTTCAATACCATCATGCAGAAAGAGGATATGTTATGATGACTTATTGGATTCCGGA
GGAACCCTGTATGCTTCCTTCGAATGCATCACATCAAGTTGGAGTTGGGGGTTTTGTGAT
CAACGATAAAAATGAGGTGCTTGTCGTGCAAGAGAAACATTTTACGCCGTCTCTTTCAGG
CCTATGGAAAATACCAACTGGTTTTATTCATGAGTCCGAGGAGATCTTTACAGGAATTGT
GAGAGAAGTGCAGGAGGAAACTGGCATTGATACTGAATTTGTGGAGGTTATGGCTTTCAG
GCATGTTCACGATGTGGCCTTTCAAAAGTCAGATTTGTTCTTCGTTTGTCTGTTAAGACC
CCTGTCAAAACAGATCATGGTTGATGATCTAGAAATTCAGGATGCTAAGTGGATGCCTCT
AGTTGAGTTTGTGGAGCAACCTCTAATCCAAGAAGACGATATGTTCAAGAAAATAATTGA
CATTTTTATCGCTAGACTAGGGAAGCGGTATTGCGGATTGTCTGTCCATCAATTGGTTTC
CAAATTTGATGACAAACTTTCTACATTGTACTTTAACACAGTTGATGACCCAAATTTGAA
CTGTCAAGCCAGTTAGCATCACAATCTGTATTGTCTTGTGTATATGTGTAATCTATAGGT
TATGGATTCTGTAAATATACTTAAAAGTTATTCAAAAGTACTTGTTACAGGGAGGTAACT
GTCATATGATTTTCTTTTTTTATAATTTGTATATTAGGTTTCTGTATCGGGTGTTTGCAC
CAAACCAAAAAATG