Microarray Probes on PGSC0003DMT400047032
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35776_PI426222305 |
JHI_St_60k_v1 |
GACTTACAAACCCCCACCAAATTTTGAACCATTCTTTTTCTAACTTACTAGATTAAGCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047032
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047032 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79620.1 |
+2 |
6e-32 |
134 |
62/99 (63%) |
Leucine-rich repeat protein kinase family protein | chr1:29957633-29962174 REVERSE LENGTH=971 |
Transcript Sequence (2623 bp)
>PGSC0003DMT400047032 2623 pgsc_dm_v3.4
TTTTGCTGTTTAGAGAACAGTTTAATCCTCAAAACAAACCAAACACTTGTGGTTTCTCTT
TCTTCCCATTAGTCTTTTTTTTCTCTCTTCATTTTAGTACACATATTGGCCCATAAGAAG
AAACTTAGGTTGCATGGTGGTGGATTTAAACAATGGTCCAAACAAGAACAATCCAACTGA
TCATCTTTTGTCTGCTTATTATTTCTATGCAAGTTTTGGTGCAGCTGGGAGCTTCAACAA
ATTCTGGTGACTATGTTGTGTTAGAGCCACTGAAGGAAGAGTGGGAAAACATACCTCCAA
GTTGGGATGGGTCTGATCCTTGTAACGATCCATGGGAAGGCATCGACTGCAACAATTCAC
GCGTTATTTCTATAAAATTATCAAGCATTAATCTGAAAGGGGAGCTATCTGGAGATATCG
AAGCGGATCTATCATACAACAAAGGCTTGACAGGTTCACTCCCTCAATCAATTGGAAATT
TGAAGAGTTTATCAATTCTGTAAGGGTATTATTACATGATATGATTAAATGTTGTTAAAT
TCACCAGCTGATTTCTTTAGAGTAATTGCTCCGAGCTGCCTCGCAGGATCCTTGTTGGTT
GTGGGTTTTCTGGACTGATACCAAACACAATCGGATCCCTTAGCCAGCTGGAATTTCTGC
AAGGATATCAATTTCTTCTGTTTGCAGCTTTTTATGCTTAATGAATTCAAGATATTGAGG
ATATGGAGTATTTGAAGAACTTTTAGTACTTAATGTTTTGTATAATATTGGAAATTTGGC
ATGAGATGAGTTGGATGGAGTAACTTGGTCAGTGAGGATTTATATAGCCGACCCCAACTT
GTTTGGGACTGACGCTTAGTTATTTTTGTTGTTGTAGTAATTCTTGTATCCCTTTTCGTT
GTCAAACTGTGAAGTCTTAGAGCTTCAGGTCTCTAGATATGTTATACTAGATTGAAATAT
TTTTCCTGTTTCTTCTACTGGGCTACATTTCTAAAACACTATCTGAATCATGCAGATAAA
CAACTTTATCGGACCGATACCAGCTTCTGTTGGTAATTTATCAAAGCTACGTTGGCTGGA
CTTAGCTGATAATAAGCTCAGTGGACCTCTTCCAATCTCCCGTGGAAGCACAGCTGGTCT
AGACATGCTTGTTCACACAAAGCATTTTCACCTGGGGAGAAATCAGTTCTCAGGTGAGAT
TCCAGATCAGCTATTCAGCTCAAATATGACTCTCAAACATTTGCTGCTTGAGCAAAACCA
GCTTACTGGAAAAATACCCCTTTCATTAGGACTTGTGCAGACTCTGGAGGTGGTGATGTT
CTGATTGGAACTCTATTCTGCTAAGAAAATGCATCAATCTTGATGTTGTGATATTACAGA
TTATGTCTTTCGATTACTTTAATTTGATTATGTGTCCTATGGTCATGTTTTGCAGAGATA
TGAGCAATAATACATTCAGCTCAGCTGATTTTCCTCAGTGGTTTTCAACTTTGCAGTCAT
TGACGACTCTGTATCCATCTCTCTCACCCTTTCTCTTTATCTCATAACATGCATGTGTGT
ATTTGTCTCTGAGTTCACGTGCCTCAGCAGAACTCACATGCATCTGAATGTATATGTTAT
CCTAATGAAGTGGTTCATAGAATTTGTTATGCACCTCATTTGTATTTGTTCTGCTCATAG
TGTAATGGAGAACACTCAACTTCAAGGAGAAATTCAGCCAACCCTCTTCAGTCTTTTTCA
GTTGCAGACTCTGTGAGTCTTCTTTTACTTTTAGGCCACGGTGCATGTCATGCAACTATT
TTCATTTTTTCGCTGTGTGCTAGTCTTGTAACAAAGTTTGAAAGGCAATACAGAGTGACC
TAGTATATGATTCTATGTTTTGCATTTTGATTTTACGACAATGAGGTGGTTATTTATGAC
AGCAACTTGAGGGGAAACAAGATCAATGGAACCCTGAATATTGCATCCAACTATAGTAGT
CAATTAAAACTGATTGATTTGCAGAACAATTCCATCGATTCATATACAGTAAGACCTGGA
TTTCCTTTTCAAATAATACTTATGCATAATCCAGTATGTTATGAAGAAGGATCAGAAGAC
TATTGTGGCATTTCCCAAACAAACTTTGGATATTCAACTCCACAAGATAATTGCCTTAAA
ACACAATGCAGTTTTGATCAAATTCTTAGCCCTACCTGTAAATGTGCTTATCCGTACACA
GGCGACTTATTCTTCAGAGCTCCTTCCTTTTCTGACTTAACAAACACAAGCATTTATGAG
TCACTTCAGAAGTCTATGCTATCTTCTTTTAGCCAAAATCAGGTGCCAGTAGATTCAGTT
TCCTTGAGTAATCCAAAAAAGAATTCAGAGTACTACCTTGACACCTGCAAGTTTTTCCAT
TTTGCCAAGATCATTTCAACCGTACAGGGATTGCTACAATTGGATTTGCACTTAGCCACC
AGACTTACAAACCCCCACCAAATTTTGAACCATTCTTTTTCTAACTTACTAGATTAAGCA
CTAACTTCTTTTGAATGACTTAATTAAGTAGTTGACACTTGACAATGACCCTTAAATTTT
GATATTCCTAAAAGAAGAAAAAAACTACTACTTTAATTTCGAG
