Microarray Probes on PGSC0003DMT400043513
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49100_PI426222305 |
JHI_St_60k_v1 |
TTGGACATGTCGTGCAGCTATTGATCGAAGCTATTGGGTATTTTGGATTGCCGGTTCTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043513
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043513 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G19390.1 |
+2 |
1e-38 |
141 |
66/179 (37%) |
Uncharacterised protein family (UPF0114) | chr4:10574903-10576355 REVERSE LENGTH=273 |
Transcript Sequence (1136 bp)
>PGSC0003DMT400043513 1136 pgsc_dm_v3.4
AAAAAAAGTAAGAGAGAAAAATAAATAAAAGAAGGTGAAATTAATTAAAATGGCGGTAAA
TGGTAGATTGTTACGTACCTCTAAGCAAATGGGGTTACGTGACAACAATGGTGGCCAGAA
TCAGCAGCAGCAACGTTGTTATTCGTTGATGAATAATTATTCGTTAAAGTTTAAGTGTTT
AAACAAAGGTGGCCTTGTTGGCGGAGCAGAGAAGAAGACAGTAGCAACTAAGGCTGTTGG
TACTGCGGTTGTGTCTGAACCAATTACGACACAAAATTGGAAGATTTCAGATCTAAGTTT
AATCGCAGATAATAATGTATCAGATCTGATACTTCAAAACTTGAAAAATTTACTCAAACA
AATGCCGCAGAAATTGCATCACTTACAGTCTTCCATAGAGAAGGGTATTTTGGATTGCCG
GTTCTTCAGTCTTTTTGCAGTCGCAGGGACATTGATTGGTTCATTATTATGCTTTATCGA
GGGCTGTTACTTAATCATAGAGTCATACGTCCACTATTTTATCGCACTCTCACATAAGTC
AGACCTTGGACATGTCGTGCAGCTATTGATCGAAGCTATTGATATGTTTCTATTGGGGAC
TGCTATGCTTACATTTGGAATGGGATTGTATGTCATGTTTGTGGGATCAAGAAATATTAA
TGTTAAAAGAGATGATCAAATGTCAGGCAAAAAGTTGTATTATTTTCAAACACTTCCATC
ATTGATGGGAATGAAATCAGTAATGCAAGCCAAATCAAGAATAGGACATGCACTTATAAT
GTTACTTCAAGTGGGAGTATTGGAGAAGTTCAAGAATATACCTGTAGTTAATGGATTGGA
TCTTGCTTGTTTTGCTGCTGCTGTTTTTGTTTCCTCCATATGTGTCTTCATTCTTTCTAG
GCTTGCTGTCACTAACACAAAGGCTGGAAACTAAGATAATTCATTTGTAACCAAAAAAAT
AGGTCTGTATACTAGTCGAAAATTAGGACTTGTTATAGTTGACCTTATTATTAAATATTC
TTTCAATTTGTAACAATTAAAATACATTTGTTCATATCTGTTTTTGTATATTTTTCGAAT
CAGTAAATGAGTTTCTGATATGGTCCCCAGTTATGGATCTAGTTATGAGACGCTGC
