Microarray Probes on PGSC0003DMT400042519

Probe IDChipProbe Sequence
CUST_18480_PI426222305 JHI_St_60k_v1 TTCACAAGAGAATGGTGAGACATGATTATACACTTATAATATAAATACAGGGTTTCGCCC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042519

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Source Transcript PGSC0003DMT400042519 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G04745.1 +1 4e-08 50 23/44 (52%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:2412863-2413303 REVERSE LENGTH=146

Transcript Sequence (636 bp)

>PGSC0003DMT400042519 636 pgsc_dm_v3.4
ATTTTCTCTACACCCTTGGAGAAAATAAAAATATACTTCATCATGAATAGTCTTATGAGT
AAACAACAATATTATGGTTACTCAAAGATGGAAATTGATGACCCTGAAGAGATGCAACAT
AGAAAAGCACAATTCTTGATTTACAAGTCATTAAAGAAATCAGATTCTATGAGAAAGCAA
CCATGGCTAAAAGTGAGAGTGTGTAAGTTGAAGATCAAGATTGGGAGAAGATTAAAGAGA
TTTAGAAAGAGCATATTGTTGACATTTTCTGTTACTAGAGGTGGAGTTTACAAACAATTT
ATGTCACAATTGAAATCTTGGAAAGGTTTGCTTAAGAGTAGAGAGACTATGGTCAGTACT
ACTACTACTCTTCAACCAATGTTCACTTGAAGTTTTCGTTACCAAACAAAGTTGAGGTCG
GCTGTATGAATCTCAATCTAAAAAAAATGAATGAGAAAAAAAACAAAAGAAGGAGCAGAG
CTTTTTTATTTTTTATTTTTTTTGGCTTATGTTTTGTTCACAAGAGAATGGTGAGACATG
ATTATACACTTATAATATAAATACAGGGTTTCGCCCTTTCTATAACTATTGATGTTCAAT
ACAATTTTCCTCATGTTATTTTTGGAAATTTAATTC