Microarray Probes on PGSC0003DMT400042202
Probe ID | Chip | Probe Sequence |
---|
CUST_18277_PI426222305 |
JHI_St_60k_v1 |
TTCTATTGTCTCAAATTGTTGGAAGCAACAGGCATCTCTACTGTCCCGGGTTCGGGTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042202
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042202 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G23310.1 |
+1 |
3e-44 |
153 |
73/87 (84%) |
glutamate:glyoxylate aminotransferase | chr1:8268720-8271329 REVERSE LENGTH=481 |
Transcript Sequence (476 bp)
>PGSC0003DMT400042202 476 pgsc_dm_v3.4
GGTGCTATGTATTCCTTCCCGCAAATTCAATTGCCTCCTGGAGCGATAGACGCTGCAAAG
AAGCTAGAGAAAGCTCCTGATGTTTTCTATTGTCTCAAATTGTTGGAAGCAACAGGCATC
TCTACTGTCCCGGGTTCGGGTTTTGGCCAAAAAGAAGGGGTGTTCCACCTAAGGACAACT
ATTTTGCCAGTTGAAGAGGAGATGCCTTCGATAATGGCGAGTTTCAAAAAGTTCAACGAT
GAATTCATGGCGCAATATGAATAGCGTGACCATGAATTCATCGAGCACTATGAATAGCGC
ACGGTGGCGCGCTATTCGATAATGTAGAAGAAAAAAATTATGATTTCAATCTTTGTTTTC
CATCTTTACTTATCTTTTTGTTGATGAATTCTCTCTCAAAATTGAACAATAACTAGTGTT
TTGTCAAGTGTTTAAATGTGTCTTTTCTTCTTAGAAGTGTATTTTTTCAAAAAAAA