Microarray Probes on PGSC0003DMT400039522
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22496_PI426222305 |
JHI_St_60k_v1 |
ATTTCTGACTTGCAAGTGTATAAAATGCAAACAGTTCTCCGGAAACTATTCAAATGCTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039522
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039522 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G73390.1 |
+3 |
0.0 |
659 |
338/413 (82%) |
Endosomal targeting BRO1-like domain-containing protein | chr1:27591079-27594148 REVERSE LENGTH=419 |
Transcript Sequence (2284 bp)
>PGSC0003DMT400039522 2284 pgsc_dm_v3.4
AATTTTCTCTCTCTATCTCTATCTCTATCTCTATCTCTCTATTTGTGACGATTGCTTATC
GAGATTTCAACTGTCCGTTGAAGATTGAAGAAGCTTCCTTTATTTTTCTTCAACTCTTTT
TAAAGACCCATTTTCTGTCTGTATTCCTCTCTATTTATTGTCTTTGTCACTTTTTTTTTT
CTTCCACAAATGTTCCAAGATTGAAATTTGCCAGCTGATTTTACAACCAAGTTGAGGTTG
AGTTGATTCCTTTGTATTTGCCTTTTCACAGAGGATTTGGGTTTTGCTTAATTAAGCTAA
AGAGTTTCTATAGTAGGGTTTATTTGCTTCATTTTGAATCAATTCCCAGAAAATACGAAC
CCCATCTTGTTGTTTTTTATGGAAAATTTTGGCTCCTCTGTTTCAAACCAGAAATTACTA
GAGAAATTGACCTATTGCCTAATCTGCTGATTATAAAACCAGGTGCTCTGGCAGATACGA
GAAGATTTTAGGATATGGGATGCTTTGTTTCGACGCCGCAGGATACTGGTGGGAATAGAA
GGCGGCCAGGAAACATTGGCGAGGTGTCTGTATTTGTTCCCGGATTACGTATCCCTAAGC
CAGTTGATTTATCTCTTGCACTTGGTGATCAATTGTCGAAAACCCTGGTGGAGCGCCTTT
CCGCTCTCAGGACCAGAATAGTGGTTATGGCAGGGCAAGAAGCTCCCACAATTACAAGGA
CAAGAAGGAAAACTGCTACTCAGCATGGAGGTTCAACCCTTGCTGATCTATTGCAGGCTC
TCGAAGATTATTTGCCTGTTCTTTTGGGGCTAGTTAAAGATGGTAGCACATTACAGCATA
AAGTGCAATTTATTTGGGTCAATCAAGAGGATGATGCAGAGGAAACTGCAATGTTTAGTG
CTTGGTATGAAATACTGTCCGTTTTGCACTTGATGGCAACACTATCATTATCGCAAGCTA
ACTTGCTGCTTCTTCCTAGAACATCTCTTGATGGTTATTCACCAAAGGTATCTGAAGAGA
GCAGGCGATCTTCTGTTGATATTTTCCTAAAGGCTGCTGGATATCTTGATTGTGCAGTTC
GAAATGTTCTTCCCCAGTTGCCAGCCGAGCAAAGGAGAAACCTGCCGGTAGACCTCGCTG
AAGGAGTTCTGCGAGCATTGTGCCTCCAAGCATTAGGGCAGGCCGTTGATATTCAACTTG
GACTTGCAATTGACAGTACTAAAGCAACACTGGCTGTCAAAAGAAGGCTTGCTTGTGAGA
TGGTAAAATACTGGCAGCAGGCTCAAGATAACATCATGAACCTTCCATTATCAAATGGTT
GGGGAGAAAAGCATAGGCTTTTCGTGAAGTGGAAATATATTGAAGCCAAGGCTTCAGCAT
ACTATTATCATGGTCTAATCCTTGACGAAGGAAACACAGAAAAATCTCATGGAATGGCGG
TAGCTGCCCTGCAAGCAGCTGATGAGTATCTTAAAGAAAGTAAGAAGGCATGTGAGGCTT
TCAATGCAGCCATTCCTCTCTCCAGAAATCCTCCACTTTGGGGAACGATGAAGTATCTTG
CCGAGAAAATCCCAAAGGACACTTCGAGCAAGGTGCGGATCAACAGGGATTTGTACTCTT
ATGAAAAGATCATGGAAACAGCCCCAACGCTGCCAGACTTTGCATTGGCTCTCAAACCTG
ATGAATATCAGCTTCCTCATGTGGATGCATCTTGGGATGATGAAACTTACAGGCAGGGGA
CAGCTTAACCCGAACAAGCTCAAAGGGTGACTTATTCAGCTCATCAGATTTCAGACTCTG
GAAAATCCAGACTGCTTGAAAATGCAGCATGACTGTCGTCATATCTCCAAGATATCAAAC
TCTTGCTATTCGCCAAAGGTCCCCTCTTTGCTGCACCTCTAGTTGAATGTGATCTCTATT
TCTTCCAGTAAATTTAATCTTTATTTCCTTTTTCCAATTAGATGTATAGTCAACCCTGTG
AGTGAGTTCTGTACAAGTCGCTTTGCTTTTGTTTGTAATCTTTGATCAACAGGAAAAAGG
ATGTATTTCTTTCCCAGCCTACCAAATAATTTCTAGTTCCACTTGTCCACCAACATGAAG
CCAGAACCAATTGTGCAAGTTGTTTGAAAGAAAATGCTTTTGTATAAATTCCACAATTTG
TGTCTTTTGAAGAAGCTTATTAGCTAAAAGAACCTCCTCTGTATCTTTACTTTTTTCAAT
TCCAATTTCTGACTTGCAAGTGTATAAAATGCAAACAGTTCTCCGGAAACTATTCAAATG
CTAG
