Microarray Probes on PGSC0003DMT400039340

Probe IDChipProbe Sequence
CUST_22324_PI426222305 JHI_St_60k_v1 CATCTTCATTATTCATGTTCATAAGCCAACCATTGGCTGTTGGTTACAATTTGGTTATGC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039340

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Source Transcript PGSC0003DMT400039340 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G54540.1 +2 6e-66 211 125/258 (48%) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:20367702-20368421 REVERSE LENGTH=239

Transcript Sequence (1021 bp)

>PGSC0003DMT400039340 1021 pgsc_dm_v3.4
GGTTCATTTGTAAGTTGTTGATCAAAAGCAATAGCGTTCTGTGTTAAGTAACAATTGACA
ACAAATGACAGAAAATCAAAGAATTCATCCAGTTGTGGACATGGAAGCACCACCACCAAC
AAGAACAACACGTCCTTTAGTGCCTCGAGGCTCGTTTAAATCAGAAAAAGGTGATCCAAC
GCGGCTTCAGCAGCCAACAGTGAACCAGCCATTCAGACGTACCGTTCCTGTAATGTATTC
AAGACCACCCACTAAGAAGAGAAGTTGCTTTTGCAAATGCATTTGCTGGACAATTAGCCT
CATCATACTCCTACTCATCATTATTGCAGCAATTGCTGGCATTCTTTACCTTGTTTTCAA
ACCAAAAATCCCTCAGTACTCTGTGGACAACCTCAGAATATCAGACTTGAGGCTAAATTT
CGACATGAGCCTCTATGCAAGATTTAATGTCAGAATCACTGCTGTGAACCCAAACAAGAA
GATTGGAATCTACTATGAGAAAGGAAGTCATTTGAGTGTGTGGTACAAGAACACACAGCT
CTGTAAAGGGTCTCTTCCCAAGTTCTACCAAGGTCATCAGAACAGAACAGTACTCGACGT
GGCCTTAACTGGGCAATCACAATATGGTAATACATTGATGTCTGCAATTCAAGAGGCAGC
ACAAACTGGAAGAATCCCATTAGATCTTAAGATTCAAGTCCCAGTTAGCGTTAAACTTGG
GAAGCTCAAATTGAGAAAGGTGAAAATATTGGGAGATTGCTTGCTGATTGTCGATAGCCT
CTCTACTAATAGTTTGGTCCGAATTAAGTCCAGTACTTGCAAGTTTGGATTGAAGCTCTA
AAAGCTTCAGCATTGTATTCAACATGTTTGTTAGTATTTAATTTAGACTTCTAGTTCAGT
TGTTGTGTATTTTATTTTATTTTTGGGATCTCTACTCTTGTTAGGAGATTTCTATTACAT
TCATCTTCATTATTCATGTTCATAAGCCAACCATTGGCTGTTGGTTACAATTTGGTTATG
C