Microarray Probes on PGSC0003DMT400038659
Probe ID | Chip | Probe Sequence |
---|
CUST_44168_PI426222305 |
JHI_St_60k_v1 |
CCGGTTGTATGTCACTTTTGGCTAAGTGGGCCTAAAATAAAGCATAGTATAGTAATAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038659
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038659 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G05300.1 |
+1 |
1e-110 |
333 |
176/359 (49%) |
zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360 |
Transcript Sequence (1242 bp)
>PGSC0003DMT400038659 1242 pgsc_dm_v3.4
AAAACTTCCCTCTTCTCTATCAACATGAAGAATAAACGTGTTGCTTTTTCTCTTCTCTTT
TTGACGTTCTTTCTTCCTGCTTTAGTTTCTTCAGAATGTACTTGCGATGAAGATGCCGAT
GATCGGAACAGAATCGAAGCGTTGAAGTATAAATTGGTAGCAGTCGCTTCGATTTTAATT
GCCGGTGCTATAGGCGTATCGATTCCAATTCTCGGTAAAATAATCCCAGCTTTTCGCCCC
GAAAACAATGTGTTTGTCCTAATTAAGGCTTTTGCGGCCGGAGTGATTTTGGCTACCGGA
TTTGTTCATATACTTCCGGATGCATTCGAGAGCTTGTCTAGTCCTTGTCTTCCGGAAAAA
CCATGGGGAGATTTTCCCTTTGCTGGACTTATTGCTATGATTTCCGCTATCGGAACGATG
ATGGTGGATTTATTGGCGACCAGTTTTTATAAGAAATCGAATCTTACGAAACAAAAGCCT
GTGAATAGTGATGAAGAAAAAGAGGTACATGTGCATACGCATTCAACTCATGGACATGCT
CATGGCTCTGTTATGTTGTCGTCATCGGAGGGTACCGATGAATTGGATTTATCTCGTCGG
AGAGTTATCTCACAGGTATTGGAATTGGGAATTTTGGTGCATTCAGTAATAATTGGTGTT
TCTTTAGGTGCCTCAGAATCTCCTAAGACAATTAAGCCCCTTGTAGCTGCATTAACTTTC
CATCAACTGTTTGAAGGCATGGGTTTAGGTGGCTGCATAGCTGAGGCGAAATTCAAGATT
AAAAAAGCTGCATTGATGTCAATTTTCTTCTCCCTAACAACACCAATTGGAATTGCAATT
GGTTTTGGAATATCAACAGTGTATAGTGAAACAAGTCCAACTGCACTCATGGTTGAAGGC
ATTTTCAATTCTGCTGCTGCTGGAATTTTGATTTACATGGCTTTAGTGGATTTACTTGCA
GCAGATTTTATGAGCACTAGAATGCAAGATAGTCCTAAACTTTTGATGGGAGCTAATATA
TTTCTTCTTTTTGGGGCCGGTTGTATGTCACTTTTGGCTAAGTGGGCCTAAAATAAAGCA
TAGTATAGTAATAATTTCATCATTTTTGTAATCTTGATTAATTCATACCCATGATTAAAT
ATGGGACAAAATTAATCTTAATCTTAAAGGTTCTTTATTTTTGCTTTAAAGAATAAAGAA
TGTTGGAATTATATAGAGAAATTGATGTTTTTAGAGGATGTG