Microarray Probes on PGSC0003DMT400031742
Probe ID | Chip | Probe Sequence |
---|
CUST_10765_PI426222305 |
JHI_St_60k_v1 |
GGCTATGGTGTTGTTGTTAGACCAAATGTTCTCCTAAGTGTTGTTTCAATATATGTTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031742
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031742 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G41590.1 |
+2 |
2e-23 |
93 |
52/106 (49%) |
Protein of unknown function (DUF567) | chr5:16632221-16633896 REVERSE LENGTH=221 |
Transcript Sequence (436 bp)
>PGSC0003DMT400031742 436 pgsc_dm_v3.4
AAAGAAGCCTATATTTTGTGTAAAGAAACAAATGAAGATTTTACATAGTAATATTAATGT
ACTTGCCCATGTTTATTATCATGGAACATCATCAGACAAGACATATTCTTATATTATTGA
AGGGTCATATGCAAACAGAACATGTAAAGTGTTGGATGCAAAATCAAGAAATGTTGTGGC
AGAAATTAGGAAGAAACAAGCAGTAATTGGTGGTGTTACTTTTGGATTAGAAGTTTTTGT
ATTAGTTGTAATGCCAGGATTTGACTCTGGTTTTGCTATGGCTATGGTGTTGTTGTTAGA
CCAAATGTTCTCCTAAGTGTTGTTTCAATATATGTTGATTAATTTTATGTAGTGATCACT
CATTTGAGGAAATGTGATGTTTTCTCTTTATTATATGATCTTGGATAATATATCGTGATC
GTTTGATATATGAGAT