Microarray Probes on PGSC0003DMT400031270
Probe ID | Chip | Probe Sequence |
---|
CUST_52077_PI426222305 |
JHI_St_60k_v1 |
ACTTTACAAGAAGGCCATTGGATATGGGAAGGTTGCGAGGGCCTACATTGCATTTTGGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031270
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031270 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G62900.1 |
+1 |
3e-23 |
101 |
69/224 (31%) |
CW-type Zinc Finger | chr3:23248868-23254810 REVERSE LENGTH=1465 |
Transcript Sequence (966 bp)
>PGSC0003DMT400031270 966 pgsc_dm_v3.4
ATGGCGGAAGAACATGAAATTGAAGAGGGAGAAATATATGATGATTCTCATATAGACATT
GATGCTAAGATTCAAACTGTTTTGGGCTGCTGTATCAAAGATTTTGAAGGAGCTGTTTCT
GCTGAGAATTTGGGGCCAAAATTTGGTGTTTATGGTTCGTTTTTGGCGAGTGATCAACTT
GTAATTCAACCACAGATATCTCAAAAACTCCCTTCCCCTACCCCTATTTCTTCTCACAAA
CCCATTAGGATTAGGATTAAGCTTCGTTCTGGTAATACTGCTGCCCCGAAGAGTAGTGAT
TTACACATTGCTTCTGATAAGACACACTGCCCGGAACTGACGACTTGTGGGGATGAGTCA
TCAGTTGCTCCATTCATTATACAAGGAGATTGGATTCGATGTTCTACATGTCGGAAGCGG
AGGCTTCTCCCGTATGGTACAAAACCCGATCAACTGTCTCAGAGTTGGCTCTGCACTATG
TTAGACTGGCTTCCTGGCATGAACTGTTGTGACATTAGCGAGGATGATACCACAACTGCT
CTACATGCCCTCTACCAAACTCTCATCCAAAGTAACTTTCAAAATCGTGGTACTTCAATT
GATGTAAAAGCACATAACGGAAGGGAAGTTTCTGTAAAGAAAAGAAAATCGAGGGAACAA
GACTACTTAGGTAATGACTTGGGTGAAAGTGATGCCAATGCTTTTGAGAGTAAATTCAGA
AAACAGAAGAAGTTGAAGGTGATTCAGACTGAAAAAAATAAGTCCAGTAGAAGCAAGGGT
GAAGGGAAATCGACAAGGAGAGATACAGGAATCAAGGATTCTGCTCCGATAGAGAGAGAA
GACCAGACGAACAAGTATAGAGTAAAGCATCAATCCGAAGCAGAATCTGGCATGATCCGC
AAGCCACTTTACAAGAAGGCCATTGGATATGGGAAGGTTGCGAGGGCCTACATTGCATTT
TGGTAG