Microarray Probes on PGSC0003DMT400031202
Probe ID | Chip | Probe Sequence |
---|
CUST_51086_PI426222305 |
JHI_St_60k_v1 |
GTTGTCTCTTTCTTTTTTCGTTGTGTTTTTGGGAGTTTTGTATCGAAATTTCACGATTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031202
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400031202 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G38540.1 |
+2 |
2e-24 |
96 |
55/118 (47%) |
lipid transfer protein 1 | chr2:16130418-16130893 FORWARD LENGTH=118 |
Transcript Sequence (702 bp)
>PGSC0003DMT400031202 702 pgsc_dm_v3.4
TAAAAATCCAAAGATCTCACTATCTTTTGCACCCATCACTCAAACAAAACACATTTCCTC
ATACTACTCTTTACTATCATTTTATCCTCTCTATTTTTCATTATTATTAACAATGGAAAT
GGTTAGCAAGATTGCATGTTTTGTGGTTTTGTGTATGGTGGTGATTGCACCCCATGCAGA
GGCATTAACTTGTGGTCAAGTTACAGCTGGCCTGGCTCCTTGCCTCCCTTATCTTCAAGG
CCGCGGCCCTCTAGGAGGCTGTTGCGGTGGTGTTAAGGGTCTGTTGGGTTCAGCCAAGAC
TACCGCGGATCGAAAGACAGCATGCACTTGCTTGAAATCAGCCGCTAATGCTATAAAGGG
AATTGATTTGAACAAAGCTGCCGGTATCCCTAGTGTTTGTGGAGTCAACATTCCTTACAA
GATCAGCCCCTCCACTGACTGTTCCACGGTTCAGTAAGGTAGATCATCAGAATATGGAAC
CATGAGGAGAATTAAGAATAAGATGAATGGAGTGTGATCCTGCTTATGGATCCATTATTT
ATGTGTTGTGTCTGTTGTCTCTTTCTTTTTTCGTTGTGTTTTTGGGAGTTTTGTATCGAA
ATTTCACGATTGGTTGTATTACGTTAATCCAATCTTGATAATATATCTATCTTATTTAGT
ATGTCTCTTGTGTACTCGATATACTTTCCTTTTCTCTATTCT