Microarray Probes on PGSC0003DMT400031147

Probe IDChipProbe Sequence
CUST_31842_PI426222305 JHI_St_60k_v1 CAGCTTCTCATGCTTTCATCGTCAATATAGGCGATCAAATTCAGGTTAATACATCTTATT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400031147

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Source Transcript PGSC0003DMT400031147 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G05600.1 +3 5e-100 211 101/168 (60%) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:1672266-1674602 FORWARD LENGTH=371

Transcript Sequence (1178 bp)

>PGSC0003DMT400031147 1178 pgsc_dm_v3.4
GTTGTTGTATATATATTTATTTTTGTAGAAAATCCAGCGGCAAGTTGCCCCTTCGTATTC
TCGTCGTATCCTCTGTAAATTTCTGTGAATACAGAGAGATTTGTTTAGATGTTGTGGGGT
AGAGAAGGAATGTTTTGCATATTATAAGGTAAATGATATTTTTTGTTATTGTTGAAATAA
AGAGTAAATTAAGTTAGCAAATAATGAAATCCCCACGAGATAATTGGCCAGAACCAATAG
TTCGTGTCCAATCTTTATCTGATAGTGGGATTTCAACAATTCCAACAAAATATGTGAAGC
CACTAAATGAGAGGCCATCATTAAGTAAGTTTAGTGATGTTAATATTCCAACGATTGATC
TTGAGGGAAGCAGTAATTGTGAAGAAATTTCAGAAGCGTGTCGAGATTGGGGATTTTTTC
AGGTTGTTAATCATGGCGTTCCGCGAGAGCTCATGGATGAAGCGCGACAAGTTTGGAGAG
AGTTTTTTCATCAGCCGATGGATGTTAAGCAAAGTTATGGAAATACGCCTAAGACTTATG
AGGGATATGGAAGTCGACTTGGAGTTGAGAAAGGTGCTATTCTTGATTGGAGTGATTATT
ATTTTCTTCACTATCTTCCTGGATATTTGAAGGACCATAACAAATGGCCTGCCCTCCCTC
TTTCCCTAAGGTATGTTACTTTTCTTTTTTCATACTTTGATACTATATATATATCTCATC
TAAAAATTTAAGTTGTATGCATGCAGGAAAGTGATGGAAGAATATTCAAAACAAGTGGTG
AATTTTGGTGGACGTTTAATGAAGATATTCTCAAAAAATCTTGGATTAAAAGAAGATGTT
TTACAAAATGCATTTGGTGGTGAAGATATAGGAGCATGTCTAAGGGTAAACTTTTATCCA
AAATGTCCACAACCAGACTTGACCTTAGGCCTTTCTCCACATTCGGATCCTGGTGGCATG
ACCATTCTCCTCCCGGACCACCATGTCGCTGGCCTTCAGGTCCGACGCAACAACGCTCAT
TGGATCACTGTAAAACCAGCTTCTCATGCTTTCATCGTCAATATAGGCGATCAAATTCAG
GTTAATACATCTTATTTTTAGTACCACAACATATATTTTGACGAAATTAATTTTCTTAAT
ACAGTACTAAAGATAAATATAATAATGCATGTATATCG