Microarray Probes on PGSC0003DMT400030572
Probe ID | Chip | Probe Sequence |
---|
CUST_47589_PI426222305 |
JHI_St_60k_v1 |
GAGTTGAGGTGTACCAACATTGCACTATTATATTGTACAAAAGGGATCATGAATTGTACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030572
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030572 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G39350.1 |
+1 |
3e-56 |
205 |
98/166 (59%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15750929-15752962 FORWARD LENGTH=677 |
Transcript Sequence (2149 bp)
>PGSC0003DMT400030572 2149 pgsc_dm_v3.4
TGGTCTGCTCTTTTTGTGTAATGCAGCTTCTTTGTTCTCGCTTTGTGTTCGTGTGGTTGT
ATAAGCTTCTAATTACGAGGTAATGTTTTCCCTGCCAAAACTAAATTTATGTCAATATTG
CATGCATTTACAATTTTATAATATTACATCTTGCTGATATATTTGTTATTATGTGTGATC
ATTGATAACTGGTAGAAATAGGATATTCAAATGCCGAATAAAAATAAGAAAATCGATCCA
AACTCTGACGAGGCAGAAGGCAGTAAAAAAGCTAGACGTCGTGATCTATATAAATGAAGC
AAGCTAACAAAAAAGAGGTTGTCTTGGCGAGAACCCGAACCAATAAAACTGAGTTGAGCA
GACAACATTTCGCTGCTGACTCAACCATGTCTACATCTTCCATCAAGCAGCTAGATTCTG
CTGAACAACATCGTATTCTACGAGAGGGTTGCTTATACCAATTCGAATTAGGTCAGAAAT
CTATATTGATATTCCTATAGAAAAATACTGATGCATGAGCATGGCGAGACTTCTTTGTCA
CTGTTTAATGAGATGGTGCAATGTGGGGTCAAACCTAATGAAGTCACTTTCACCTCGGTT
TTGCATGCTTGTGGTCATGCTGGTTTGGTGGATGTCGGTCTTTGTTTGTTTAATTTTATG
CTTAGAAATCACTCTGGTAGTATTAGAACAGATCATTATACCTGTATGGTTGATCTTCTT
GGTCGAGCTGGCCGACTTGATGAGGCATATGAACTTATTAAAATTATGACTTTTGAACCA
AGTCATGGCATCTGGGGTGCATTACTTGGTGGCTGTGTGATACATGAAAATATGGAACTG
GGAGAATTGTCTGCAAGGTAGCTGTTTAAGCTGGAGCCAGAGAACAAAGGAAATTATATA
CTGTTGGAAAAGATCTATTCTGCAGTTGGAGGGTGTAAAGATGCAGAGAATGTGCGACTT
TTGATGAATGAAGTCGGACTGCTAAAGGCACCAGCTCAAAGTGTCATTGGGTGACAAGTA
GGTGAATTCTTTTAGTTTCCTTGCAAATAGAGCTAAACGAGGGCTGCAGGGTGAGGGTAA
CATCTGAGAAATATACAACAATACGACCAAAGCTAACCCTCTTAAGTCTCCGGTGGTGTT
TATAATCTCCTCGATTTTTGCTATTGCAATTATAATGTAGTTTCAACTCACATGTGTTAG
CTGGACATTTCTATTTTCTTCGTTGTTACCTTCTGCTCTTAATTATTTTTTCTGTCATTT
TGGTTTATATTTACTCATGTTGTTTAAGTAATTTCATCATAAATACAACTGGTTTGCACT
AAGGTATATATTACGCTGAAACAATGTTACATCTCACTTCAAAAGAGATCTACCACATTC
GCTGCATTAAGGTATATATTACGCCTGATTAAAATAAAATGCAATATAAATGCCTATTGT
TAACTAATCTTTTGTCATCCATAAAAATTCAAACAACTCCCCTAGAAACAAATGCTGCCT
CTTGCAAATGTGACAAGACAATTAACTGGAAAGACATTTACCATTCAAGTCAAAAAGTCA
TTTGCTAAAACAATGGATAGAACTCCCGGAAAATTAATTATCTTGTCATATGCGAAAAAA
GAAAACATCATCAGTGCACCATCATCACCTGCTCCATTGGACACAACAGGAAGCAGCAAA
AGGAAGATCGAAAATCCTGTGACAAGCAAGAGGCCACTTCCCATCACAAACATGTTCTAG
AGGTGAAGACTCCCCCTCCAAAACACTATAACAAGTGAAAAGGCATGTCGGCTCCACTTT
GCAATGTGATTGGAGCCATTTTTTGTCACTGTAGCAAGCATAATCATAACGGATCACTTT
CCTTTTGCGTATGTAAATAAAATGTACATAGCTATGTTATAAAACTTGACTCCAACACTA
ATATATAATTTTTGGTTGTGTCACACTTGTTATGTACTTAATATGCAATCTTCATATATG
TATCCCCTTGAAATGTTGGGCCCGTGCTGGCACGGGCCATCCACTTCTAGTCTAGTTACT
ACTTATTAGAAGTGAGAGTTGAGGTGTACCAACATTGCACTATTATATTGTACAAAAGGG
ATCATGAATTGTACTATATATGTTCGTCCTGCTTTTTTTCCTCTTTTAC