Microarray Probes on PGSC0003DMT400026363
Probe ID | Chip | Probe Sequence |
---|
CUST_27152_PI426222305 |
JHI_St_60k_v1 |
AATGCTGTTCCAGCTATAGCTCTTCTTTCATACGGTTTCTTCCATAAAGGCCTCGTCCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026363
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026363 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G25700.1 |
+2 |
1e-109 |
330 |
194/284 (68%) |
beta-hydroxylase 1 | chr4:13094142-13095866 REVERSE LENGTH=310 |
Transcript Sequence (1345 bp)
>PGSC0003DMT400026363 1345 pgsc_dm_v3.4
TATACACTTTCCACAAGCACTCCACAAACTGAATATCCATCGTATTTGTCCACTTAACCT
GCCCTTTCAATTTCACTCATCAGCTAATTTGGATCCTCCACCGTCCATGGCGGCCGGAAT
TTCAGCCTCCGCTGGTTCCCGAACTATTTGCCTCCGTCACAACCCGTTTCGCGGTCCAAA
ATCCGCCTCAACCGCCCCGCCAGTTCTGTTCTTCTCTCCGTTAACTCGCAATTTTGGCGC
AATTTTGCTGTCTCGAAGAAAGCCGAGGTTGGCGGTTTGCTTTGTGCTGAAGAATGAGAA
ATTGAATAGTACTATCCAAAGTGAGAGTGAAGTAATACAGGATCAGATACAAGTAGAGAT
TAATGAGGAGAAGAGTTTAGCTGCCTGTTGGCTGGCGGAAAAATTGGCGAGGAAGAAATC
GGAGAGGTTTACTTATCTTGTGGCGGCTGTCATGTCTAGTTTAGGGATTACTTCTATGGC
GATTTTGTCAGTTTATTACAGATTTTCATGGCAAATGGAGGGTGGAGAAGTGCCTTTTTC
TGAAATGTTAGCTACATTCACTCTCTCGTTTGGCGCTGCCGTAGGAATGGAGTACTGGGC
GAGATGGGCTCATAGAGCACTATGGCATGCTTCTTTATGGCACATGCACGAGTCACACCA
TAGACCAAGAGAAGGACCTTTTGAGATGAACGACGTTTTCGCCATAACGAATGCTGTTCC
AGCTATAGCTCTTCTTTCATACGGTTTCTTCCATAAAGGCCTCGTCCCTGGCCTCTGTTT
TGGCGCTGGATTGGGGATCACAGTATTTGGTATGGCTTACATGTTCGTTCACGATGGACT
GGTTCATAAGAGATTCCCCGTAGGGCCTATTGCCAACGTGCCTTACTTTCGGAGGGTAGC
TGCTGCACATCAGCTTCATCACTCGGACAAATTTGATGGTGTACCATATGGCTTGTTCCT
AGGACCTAAGGAATTGGAAGAAGTAGGAGGGCTTGAAGAGTTGGAAAAGGAAGTCAACCG
AAGAATTAAAATTTCTAAGGAATTATTATGATCAAAAGATACTTCTAATAATAAAATGCA
CTTGTATTTAGGCTCTAGATCATTAATGGGAAAAAGATAGAAATATATATACATATATGA
AAATAATATAATGAAACAAGCTTTCTATGGAAATTGGAAAGTTCCTAGTCTTCTTTTTGG
TTCCTGTACGCAAAAGGTGAACAATTTGATATTCTGGTACTTGTTGACAAACCAGAAGAA
CGATAATTCAAAACAAAGAAATGTACAATTAGACTTATCGTATTGGTGGCGGTGGACAGA
TTCAAGATTTTCTCTAAGGGAGATT