Microarray Probes on PGSC0003DMT400026280
Probe ID | Chip | Probe Sequence |
---|
CUST_27047_PI426222305 |
JHI_St_60k_v1 |
GGCTCTCAATAACAAGCCTTATCCATTTGGCTTCACCAAAGTAAACAAGAATATTGATGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026280
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026280 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G73260.1 |
+1 |
2e-21 |
89 |
64/188 (34%) |
kunitz trypsin inhibitor 1 | chr1:27547410-27548057 REVERSE LENGTH=215 |
Transcript Sequence (672 bp)
>PGSC0003DMT400026280 672 pgsc_dm_v3.4
ATGAAGTCTATTAGTAATATTTTGAGTTTCCTCTTGGTTTCAAGTAGCCTCTCTTTGGTT
TCCTTTTCTCAATCTTTCACTTCTGATAATAATCCTGTGCTCGACATGGACGGCGAACCA
CTCAAGATAAACGAAGAGTACTCCATTCTCAGTATTCCCTATGGCGGTGGAAGCGTATAC
TTAGCTGATCTTGGAAACACCAAATGCCCAAACGGCATCGTGCAGGACAGTTCTGGTGAA
TTTGATCACAACACGCCCGTGACGTTTTTCACTATGCAACTTGGAAGTCATTATGTGTTT
GAAAACCAAGACGTTAGTATAATGTTCTCAACTACAACTTCTAATCTATGTGTTAACGAA
ACTGTTTGGAAAGCTGGTGATTACATGCTAGGGCCGGTGCATCCGCCACCTAGGTTTGTT
ATAACTGGTGGTACCTTAGGAATTCCAGGACCTAATACCTTAAAGAACTGGTTCAAAATT
GAGAAATATGAGACGGGGAGACCTCATTCTTACAAGTTAAGGTATTGTCCTAGTCAATTT
ATGTGTCCAACATGCCAATTTGATTGTGCAGATGTCGGACTATACGAAAATAAGGGATAC
GCCCGTCTGGCTCTCAATAACAAGCCTTATCCATTTGGCTTCACCAAAGTAAACAAGAAT
ATTGATGCATAG