Microarray Probes on PGSC0003DMT400026240

Probe IDChipProbe Sequence
CUST_27064_PI426222305 JHI_St_60k_v1 GTTGAAATTTCTTGGGTCCACCAATTAGATTATTTTCTAGGTACATATGGTTGGTCGTGT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026240

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400026240 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G52510.1 +1 4e-151 461 318/694 (46%) SCARECROW-like 8 | chr5:21307196-21309118 FORWARD LENGTH=640

Transcript Sequence (2499 bp)

>PGSC0003DMT400026240 2499 pgsc_dm_v3.4
ATCATGACAAGAATCAATCAAATTGCTTAACAACAAGCTATTTTTCTCTCTCTTTCTCTC
TATAAGGAAATTACCTTTTCCCTGTAATGCAGAATTTTGATAAAGATCCAAACTTTTGAG
GTTTTTTTGAAGATCATAAAGCCATTTTGGCCGGAATTTTGTTTAAATATGTCGTCAGGT
TTCTCCGGCGAGTTTTACGGTGCCGGTGGGAGCAACAATGGAAGATCTACCATAAATAAC
AACTCACAAAGGCCTTATTCTTCACCGCTATCGGGTATTTTGCCTGACCCGGTTACACAG
ATCGTTCATCAAGGGAGACCTAATTTGATGGGGAAGCGATCTCTTGCGGAGTTTCAACAA
CAACAACAATTGCAGTTTCTACAACTTCAACAGCAGCAGCAACAGCAGAAACAACAGCAG
CAGCAGATGATGCTACTTCAACAGCAGCAGCAGCAAGGACTTGGGTTTTATCTCCGTAAC
GTAAAACCCAGAAGTTATCAGCAGTCTTCTCCAATGTCTCCTCTTTCCCCTGTAGATTTT
TCTGTTGCCGCTGCTGCTGCTTCTTCAATTTCATCTGAATTTTCTTCGAATTCAAATGTC
TCTACGATGATGAACACGCGCCACGCTCTACCTGTTCACCAGCAATTCCGGTCACAGCCT
GCTAATATTGGTGGGTTTTTATCTCCAGGTATTCAGAATTATTCTACAGGGGTTTCGTCT
CTAAATCCGGTTCAAAACAGAGCAACCATCGGAGTACAGGAACTGTTGTCACAAGAATCG
GATAAAAAGATGATGAATTGTCTTCAAGAGATTGAGAAACAGCTCTTAGACGACAACGAT
GAAGAAGAAGGCGACACAGTTTCAGTCGTCACCAACAACGAGTGGTCGGAGACAATACAG
AATCTGATTAGCCCCTGTCATAATCAGAACCAAAACCAAATTCAGAAACTGGCATCACTA
TCTCCATCCTCTTCAACTTCTTCGTGTGCTTCTTCAACAGAGTCTCCGTCAATATCTTGT
CCCAAACAGTCTATAATAGAAGCAGCTACAGCAATATCCGATGAGAAAAACGACGTCGCA
GTGGAGATCCTCACGCGCCTATCACAAGTTGCCAATATCAGAGGTTCCTCTGACCAGCGG
CTAACGGCGTACATGGTTGCCGCTTTACGGTCGCGCGTGAACCCCATCGATTACCCACCG
CCGGTGCTGGAGCTGCGAAGCAGAGAGCATACAGATACTACTCATAATCTATACGAGGTA
TCTCCCTGTTTCAAGCTCGGTTTCATGGCTGCCAATCTAGCTATCCTTGAAGCTGTAGCT
GACCACCCTTTCAACAAGCTTCACGTCATTGATTTCGACATCGGCCAAGGCGGACAGTAC
TTGCATTTACTGCATGCACTGGCTGCCAAGAAATCAAACAGCCCAGCCGTTTTAAAAATC
ACGGCTTTCACAGAACAAGCAGGCGGAGTTGACGAGAGATTCAATTCTATCAACGTGGAG
CTTAACTCCGTCGCTAATCGGCTTGGGGTCTGCTTATATTTCAACGTAATGTCTTGTAAG
GTAACCGATTTGAGCCGGGAAAACTTAGGGCTTGAACCTGATGATGCATTAGCAGTGAAT
TTCGCATTCAAATTATACAGATTACCCGACGAAAGCGTAACAACGGAGAATCTCCGTGAC
GAGCTTCTCCGTCGGGTAAAAGCGTTATCACCGAAGGTGGTAACGGTGGTGGAGCAAGAA
ATGAACGGCAACACCGCTCCTTTTCTAGCGCGTGTGAATGAAGCGTGTGGTCATTACGGT
GCAATATTCGACTCGCTGGATGCTACAGTGTCAAGAGACAACATGGACCGAGTTAGGATC
GAAGAGGGACTGAGTCGGAAAATGTCTAATTCGGTAGCGTGCGAAGGGAGGGACCGCGTT
GAAAGATGCGAGGTATTTGGGAAGTGGAGGGCCCGTATGAGCATGGCTGGGTTCGGGCCG
AGGCCCGTTAGTCAAATCGTGGCGGATTCTTTGCGTTCAAAGCTTAATTCGGGTACACGT
GGCAACCCGGGCTTTACCGTGAATGAACAAAGTGGAGGTATTTGCTTTGGTTGGATGGGA
CGAACTCTCACCGTCGCATCAGCTTGGCGTTAACTTTAGCATTATTTTCTAATCAAGAGA
AAAATATTCTGATTATTATCTTATTAATATTAATCTTCAATGTGATTTGCTGTATTAAGG
GGCTTTCTTTAATTTTGGTTATTATTATTATTGTTAATGAAAATTCAGATGATGTCCCTC
ATTCGAAAAAAAAAAAGGCATGAATATTAATATTTAGATTCTCTTTTTGTAAATATATTT
GTGTTAGTGCATGTATCGCTGTTGGATACATTTTATTTTTAGGCTATGGTGTTTGGCAGA
ATGCGGACTTGTGTTTGTATTAAACGAATGGCTTTAGATGTTGAAATTTCTTGGGTCCAC
CAATTAGATTATTTTCTAGGTACATATGGTTGGTCGTGT