Microarray Probes on PGSC0003DMT400026192

Probe IDChipProbe Sequence
CUST_895_PI426222305 JHI_St_60k_v1 CACAACGCCTTCCTTGCAAACACTGAATAGTAATATTTGTATGGTACTTACCTCAAAATA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026192

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Source Transcript PGSC0003DMT400026192 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g089770.2 +3 0.0 657 322/344 (94%) genomic_reference:SL2.50ch02 gene_region:46055433-46058696 transcript_region:SL2.50ch02:46055433..46058696+ go_terms:GO:0004022,GO:0045551 functional_description:Dihydroflavonol-4-reductase (AHRD V1 ***- B6TK03_MAIZE); contains Interpro domain(s) IPR016040 NAD(P)-binding domain
TAIR PP10 AT5G14700.1 +3 6e-71 232 117/258 (45%) NAD(P)-binding Rossmann-fold superfamily protein | chr5:4740502-4743327 REVERSE LENGTH=368

Transcript Sequence (1371 bp)

>PGSC0003DMT400026192 1371 pgsc_dm_v3.4
TTTCATATTTACCATTTTATCTACTACTTAACTAATTTATTATCTTTTGGTACATATAGA
GCTTGTATAAGTGTATATAAGTAGGCCACTCTCTAACTATGTCAACCCAGCTAAGTGGCA
GATACCCTTAAGGCTCTGAAATTTCATAATTGAGCTGCAGAAAGAGAGAGATGGATGTCG
CGATATCCTTAGAATTGGAGCCACTAAAGCAGATGAATGATCATGGAATGTTCTTTTCTA
GTGGTAATTTTATCTGCAGTTTGAATGCAAGAGACAGGAAAATTGTTTGTGTCACCAGTG
GAAACTCCTACTTTGGTTCTCACTTGATCAAGAAGCTTTTGGCATATGGTTACCTTGTTC
GAGTTATTATTCAAAATCAAGCTAATCTTGAGGACATGAAGGAGCTGATGAGGGAAGAAG
TGAAGCAACTGGAGAGTGTTGTGGTGGCAAGAATGGATGATTTAGATAGCCTCTGCAATG
CTTTTAGAGGTTGTCATGTTGTTTTCCACACATCATCTTTCGTTGATCCGCGAGGGATCT
CTGGATACACGGAACGAATGGCATTTATTGAAGCTGAAGCAGCAAAGAATGTCATAGAAG
CTTGTGGCAGGGCAGCATATGTTAAAAGATGCATTTTCACCTCTTCTCTACTTGCATGCA
TCTGGAAAAATGACCTGCCAAACCTCATAGATGAGAGCTCTTGGAGTGATGAGACATTCT
GTAGAGAACACAAGCTTTGGCTAGCCTTGGCCAAGACCAGGGCAGAAAAGGTTGCTTGGA
GGAAAGCAAGGGAGATGAAGGTGAAACTTGTTACTTTATGTCCTGGACTTCTCATGGCAC
CATCTTTCCCAAACGCTCACCTTGAAACTTCTCTCCCGTACCTCAAAGGTGGCTATTTCA
TGCTAAGACAAGGAATTCTAGCAACTGAAGATGTAAGTAAAGTGGCAGAAGCACATATTT
ACGTCTATGAAGATATGGACTATGGAGCGTGTGGAAGATATATTTGCTTTGGAAATATAG
TTGGAACATTGGAAGAGGCCATACAACTTGAAAATGGCTTGAATATATCTGGCCACTTGT
CTGGGGATCAAAGCCCTCTTGCAGTAGCAGTTGAAAATAATGAAATTCCTCCCAGAATTA
CTAAGTCAAAGCTCAGTAGATTACTATTCCATGCGTCACAACGCCTTCCTTGCAAACACT
GAATAGTAATATTTGTATGGTACTTACCTCAAAATATTATTACAAAAAAGGTAGCAATTG
GAGAAGTGTAGTCAGGAATTTATATAAAGGTAATGTCATGATTGATAATCGAATTTGTGA
GCAGAAGTTATTTTTCAGCTCAATTTACCACAACACTATATTCAATAATTT