Microarray Probes on PGSC0003DMT400023603
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9427_PI426222305 |
JHI_St_60k_v1 |
GTTGCTTCCTCAAATATTGTTTCCTTTGCAACAAGACTTTGAGACTCGACAAAGAAGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023603
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023603 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G53903.1 |
+3 |
7e-25 |
98 |
56/131 (43%) |
Protein of unknown function (DUF581) | chr1:20132363-20132842 FORWARD LENGTH=126 |
Transcript Sequence (799 bp)
>PGSC0003DMT400023603 799 pgsc_dm_v3.4
GTGCTTACTAGCTCATTTCCCCAATTTCTGCCTTATTGTTTTTGTGCTTATCCTAAAAAA
TTAAAATGGGTCAAAAATCAGTTGCTGTTGGGCTAAAGATTCTAATAAATCAGAAGAAGA
TTTGTCAAAGCAAGGCAATTGCTCCTAATAATGTTTTAATTATGTATAGTTCAAGATTCA
CCAAAGTCAAACCCATCTTCCACACAAATCCTACTCAATCTATCAGTATTGAACATAATT
GTTGCTTCCTCAAATATTGTTTCCTTTGCAACAAGACTTTGAGACTCGACAAAGAAGTTT
ATATGTACAAGGGTGATCTTGGATTCTGCAGTGTGGAGTGTAGAAACAGGCAGATTTATT
TGGATGAAATGAAAGAACTTGAGACTTATACTAAAAATATGTTACGATCTTTTCGCCGAT
GTGGAGACGATAACCGCCGGCGGTGTAGTGAGGCTTCGGCTCTACTGGAGGAATACAATC
AACGGCGAAATCCCCTAGCATATTCTAAGAAAAATACTCGACCTATATTTACATTATCAT
AATTCGAATTCGTTTTGCTTTATTCCCAAATTCTTTTATTGGTTACAATAAAATTATTGA
AAGAATATAGAGCAAGTATTATTGATCTGACTATTCCATATATGTTTTGGATAAGAAATC
TTTGATTAAAAACTAAAGAAATTTTGTTATTTTACGGTACTAGCTATTTAGTGATTTTGT
TTTCGAAAATGAGTTGACAAGCATATATTCGAGAAAAGTTATAATTAAAAGTGACAATAT
GAGCTGTCGAAGATGTTGA
