Microarray Probes on PGSC0003DMT400021235
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23821_PI426222305 |
JHI_St_60k_v1 |
AATTCGACGTGGAAGTTGAAGATCTTGTTGCAAAAACACCTGAATGGGCTTCCATCTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021235
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021235 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G26150.1 |
+1 |
1e-101 |
315 |
173/329 (53%) |
heat shock transcription factor A2 | chr2:11135856-11137217 FORWARD LENGTH=345 |
Transcript Sequence (1817 bp)
>PGSC0003DMT400021235 1817 pgsc_dm_v3.4
CTTCCATCTGTTTTTCTCTAGAACTTTCTAGTCCACATCCCATTCTTATATTACTCACAA
ATCACAGACTCACTCCTTAATACCCCTCAAAACTCTTTTGCTAATCCTAATTAGCAAACT
GAACAAGCAATGGAGGAAGTAGTGAAAGTGAAGGTCGAAGAAGATGGCATTCCGACGGCC
GTGCTGCCTATGGAAGGGTTGCACGACGTTGGTCCGCCACCATTTCTGAGCAAAACTTAT
GAAATGGTGGAAGATTCTTCAACTGATGAAGTCATATCGTGGAGCACAACAAGGAATAGC
TTTATTGTTTGGGATTCTCACAAGTTTTCCACCACATTGTTGCCTAGATTTTTCAAGCAC
AGCAATTTTTCCAGTTTCATTCGGCAGCTTAACACATATGGATTTAGAAAGGTGGATCCT
GACAGATGGGAATTTGCGAATGAAGGTTTCCTGGGAGGGCAGAAGCATCTTTTGAAGACT
ATAAAGAGGAGGAGGAATGTTGGTCAAAGTATGAATCAACAAGGATCCGGCGCTTGCATT
GAAATTGGTTATTATGGGATGGAGGAGGAGTTAGAAAGATTAAAGCGGGATAAAAACGTG
TTGATGACTGAAATAGTTAAACTTAGGCAGCAACAGCAGAGTACGAGGAATCAGATCATT
GCCATGGGAGAAAAAATCGAAAGGCAGGAGAGGAAACAAGAGCAGATGATGAGTTTCTTA
GCAAAGATCTTCAGCAATCCAACTTTTCTCCAGCAGTACTTGGACAAACATGTGCAGAGA
AAAGATAAACAACGTATCGAAGTTGGACAAAAGAGGAGACTAACGATGACCCCCAGTGCT
GAGAACCTTCAAGATGTAGCCACACGAAGTGATCATCAGCCTATGAATTACTCCTCACAC
CAAGAGCGTGAAGCTGAGCTTGCAAGTATTGAAATGTTATTCTCTGCTGCAATGGACAAT
GAATCAAGCAGCAATGTCAGGTCGGCTTCTGTTGTGACAGCAAATGGCACAGGGCCTGAA
GATATTTGGGAAGAGTTGTTCAGTGAAGATCTTATATCCGGGGATCGAGCAGAGGAAGTA
CTGGTTGTTGAACAACCTGAATTCGACGTGGAAGTTGAAGATCTTGTTGCAAAAACACCT
GAATGGGGTTAAGATGCCAGATATACTACTACTTTCGGGAAGCAAGCTTTGAGGCAGTCT
CTAGTAGCGCATGTTTACAAAATCATACAATTGACAATGGTATAGCTTAATTATGGCTTC
TGCATTATCTAGTGCTCATAAACCTTTTAGGGGTTGTTTAAATATGCAGAGGTTAGTTAG
GGGTTGGCTTGTAACTGATGTTTGGTTCATACCTATATAAAGTGGTCTCTCTATACTATA
TACTATATTATACTGGAGAATGAGGGGATATATACTATACTGGAGAATGAGGGGATAGAG
TATACGGAGATCTTATATTCCTATGAGATGTTTGGTTTGTCTCGATTAGATTGAGAAGAA
AAGCGTTGCAAGTGAGCAGCATCAACATGGACTCGGCTTTCCTCCACTGCATCAACCAAC
ACCAGTTACTTTTTAAAACATTGGCATGCATGTGTCCACTTAGCAAATCAATGAATCTTA
TATATTTAGGGAAAAGGCATAAATTTTTCCCTGAACTTGTGCCGAAAAGTCAGTTACACG
TTCGAACTATTGTGACGACCTATTACACATCTAATCTTGTTCAAAGTGATATTAATACCC
CTTCCGAAGACAATCTCAGTTTTGTGTAAAAAAAGTGTTGTACACGCGTTTTCACACATA
AATAATATTATTTAAAA
