Microarray Probes on PGSC0003DMT400020670
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29022_PI426222305 |
JHI_St_60k_v1 |
ATTTGCACCGTGATAGTAAGTGGCTTATGTTGAAGATAACTATCTTCTAGTAAAAGGGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020670
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020670 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G45249.3 |
+3 |
7e-105 |
330 |
239/446 (54%) |
abscisic acid responsive elements-binding factor 2 | chr1:17165420-17167415 REVERSE LENGTH=427 |
Transcript Sequence (2135 bp)
>PGSC0003DMT400020670 2135 pgsc_dm_v3.4
TATTTGGGCTACCGACTTCTTTTTAAAAAAAGTCCTAATTAGCCACTTGGCACTTTCAAG
AACCACTCAAAGCCAAAGAAGAAACGTCTAGCAGTGTACAAGTGAAAGCCAAAAAAAGGA
GAAAAAGAAAAAAAAGGTTTTGTGATTCTTGAATAACAGAGGTGAGGTTTGAAGGAGGAT
TAGGTGAGGACTGAGGAGTTTTTAGTGAAATGGGGAGTAATTATCATTTCAAGAACTTTG
GTAATGAGCCACCAGGTGAGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGGAAGCAGCTGG
GGAACTTTGGATTGCCGCGGCAGTCATCTATCTATTCGTTGACATTTGATGAGTTTCTTA
GCTCAACAGGAGGGAGTGGTAAGGATTTTGGGTCAATGAACATGGATGAGTTGTTAAAGA
ACATATGGAATGCTGAGGAGAATCAAACAATAGGAGGGCCTGGGATTAATGGGCAAGAGG
TTGGTGTTCCACGTGGGCATTTGCAGAGGCAAGGATCTTTGACTTTACCTAGGACACTGA
GTCATAAGACTGTAGATGAAGTTTGGAGAGATATGTCAAAGGAGCATGGTGGTGGGAAGG
ATGGAAATAGTGTTGGAGTGCCACCAAATATACCTCAGACTCAGAGGCAACAGACTTTTG
GGGAGATAACACTTGAGGAATTCCTAGTTAGAGCTGGAGTTGTCAGAGAAGATGCACTGT
TTGCTGCGAAATCGAATAATACTGGAGGAATCTTTGGTGATTTGTCCTATGCTGGGAATA
ATACAGGGCTTGCATTTGGATATCAACAAGCTAATAATAGGAACACAGGTTTAATGGCTG
GTAGTATCCCTAACAAGAATGGTGAAACTGTTATCCAGACTGCTAATTTGCCACTGAATG
TGAATGGGGTCAGATCCACACAACAACAGCTAAGACCACAGCAACTGCAACAGAACCATC
AACCACAGCAACAGCAGCCACAGCAGCAACCGATTTTCCCTAAGCAGCCTGCTTTGCCCT
ATGGTGCTCCTATGGCTATCCCAAATAGTGGGCAGTTGGGCAGTCCGGGAATGAGGGTAG
GGATGGTTGGTATCCCTGATCCAGCACTCAACTCTAATTTCATTCAAGGCACTGCTCTAA
TGGGTGGAGGAATGAATATGGTAGGTTTAGGAGCCAGTGGGGTTACTGTTGCAACAGCAT
CTCCAGGTGTTTCATCATCAGATGGACTTGGGAAAAGCAATGGAGATACACCTTCTGTAT
CTCCAGTTCCTTATGTGTTTAATGGTGGTTTAAGAGGCAGGAAATACAGTACTGTGGAGA
AGGTTGTTGAAAGGAGGCAGAGGAGAATGATAAAAAATAGAGAGTCAGCTGCTAGATCAA
GAGCTCGAAAGCAGGCCTATACTATGGAGCTAGAAGCAGAAGTCGCAAAACTAAAAGAAG
AAAACGATGAACTTCAAAAGAAACAGGAAGAAATGTTGGAAATGCAGAAGAATCAGGTTA
TGGAAATGATGAACCTTCATAAGGGAGCTAAAAGGCGATGCTTAAGACGGACACAAACTG
GTCCATGGTAAAAAGGGTTTCAGAAATTAGTGGTATTAGCCCATATTTACAGACTTATAG
TAGGTGCCCTGTACAGAAAGGGAATTATGTATTCACTGTAGATCAGAAGAGAAGAGTTGT
CTTTTTGCTGTAGGTTTTTCAGTGTGTTAATTTCTTATTCTCCCTCGATGGCATCATGCA
TAGAATAGAGCCAGAATGTAGAAATACCTAGTTGACAGCAGACACACATAAAAATACATA
TATTAATGGCTCCTTTTGTAATGTGTTCTGTACAAGTGATTTGGAATATTGTTTTGACAG
GTTCACTTTTAAGCTATGATGCTCGGATCCTCCAGAAATGACTAAGAATCCGAGAAATGT
ATCTTGAAAGTAATTATCGTAGGAGTTTATGTATTTTTAGTTAAAAGTGTTATAAGGAAA
TTCAGTATGCTGTCCAAATGTTTTTCTGAAAGGGTTTACCACACGAACAAAACTTCAAAA
TATCACCATACTTGCAAATGTGTAATTTAACACCAATTTGCACCGTGATAGTAAGTGGCT
TATGTTGAAGATAACTATCTTCTAGTAAAAGGGCA
