Microarray Probes on PGSC0003DMT400019410
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47856_PI426222305 |
JHI_St_60k_v1 |
CCCTAGAAGGTTATGGTGGAGGATAACAAAATTGTAATATACTATGAACGAGATCTTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019410
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019410 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28500.1 |
+2 |
1e-63 |
204 |
109/183 (60%) |
LOB domain-containing protein 11 | chr2:12186603-12188110 REVERSE LENGTH=232 |
Transcript Sequence (999 bp)
>PGSC0003DMT400019410 999 pgsc_dm_v3.4
TCTCTTTGCTCTGCTTTCTTAATTCCTTGCACGTACACTTTTTTATATAAATTTTAAAAA
TATGGAGTCCAGCAACACGACGATCACCACCACAACCCCGTCGTCTCCTTGCTCCGTATT
GCCGCCAACTAACTCTCCATCTCCGCCGCGGGTCGTGGCCACACCTTGTGCTGCCTGTAA
GATATTACGGCGGAGATGCGCGGAGAAATGTGTGTTGGCACCTTATTTTCCTCCCAGTGA
ACCCATCAAATTCACCATTGCTCATCGTGTTTTTGGTGCTAGCAATATTATCAAGTTCTT
GCAGGAATTGCCGGAATATCAAAGAGCAGATGCTGTAAGTAGCATGGTGTACGAGGCTAA
CGCTAGGATGAGGGATCCAGTCTATGGTTCTGCTGGGGCAATTTGTCAACTTCTAAAACA
AGTAAATGAGCTACAAGCACAATTAGCCAAAACACAAGCTGAACTTGTCAATATCCAATG
CCAACAAGCTAATCTCATGGCCTTTGTTTACATGGAAATGGGACCATCTCCACCAACATC
ACCCCAACAATCTTTGGACAAGTTCACCAATAGTACTACACATGCCACCACCCAAAATAA
CATGAGTTTCCTAGATGAAAACAACAATTATGGGACCCTGGAGACTCTTTGGACATGATC
AAAAAGGAAGATATACGTGTATGTTCCACGAACAACATTCGCACATCGAGACAGATCTAG
AACTTAAATTTGATTGATTCAAGTTTTCAAGTTCTTATTATTGAATTCGATATGATTACA
CTTTTGAAATATCTTATAGGTTATGTCAAAACTTTAGTGTTATTTTAAATATTATGTTTC
GTGTAAAAAATAATGGATGCAATGTAACAGAATCTAGTAAACCGGGGTTTATCTGCCTCT
GTGTTTATATATAGTCATGGGAGCAGATTTAACTCCCTAGAAGGTTATGGTGGAGGATAA
CAAAATTGTAATATACTATGAACGAGATCTTGATAGATA
