Microarray Probes on PGSC0003DMT400017761

Probe IDChipProbe Sequence
CUST_33293_PI426222305 JHI_St_60k_v1 ATACATGGTGGGTTCTGGAAATTCTGTAGGTCATTGTAGGAAGAGCTGTAAGGTTTGCTC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017761

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400017761 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G28490.1 +1 4e-132 379 179/250 (72%) Oxoglutarate/iron-dependent oxygenase | chr3:10679150-10680654 REVERSE LENGTH=288

Transcript Sequence (753 bp)

>PGSC0003DMT400017761 753 pgsc_dm_v3.4
AGGGCTTTCGTATATAGGAATTTTTTGACCGATGAGGAGTGTGATCATCTCGTTACTCTG
GCTAAAGATAAGCTGGAGAAGTCTATGGTGGCTGATAATGAGTCAGGAAAGAGCATAGAG
AGTGAAGTTCGGACAAGCTCCGGCATGTTTCTTAGCAAGGGCCAGGATGAAGTAGTGGCT
AATGTGGAGGCTAGGATAGCTTCCTGGACATTCCTTCCTAAAGAGAATGGGGAATCTATT
CAAATACTGCATTATGAACATGGCCAAAAGTATGAGCCACATTATGATTATTTCCACGAC
AAGGTCAATCAAGAGCTAGGTGGTCATCGGGTGGCTACTGTTCTTATGTATTTGTCAGAT
GTAGAGAAGGGTGGGGAAACCATTTTTCCTAATTCAGAGGCAAAAAAATCTCAGCCAAAG
GGTGATGACTGGTCAGATTGTGCTAAAAATGGATATGCAGTGAAACCTAGGAAGGGTGAT
GCATTGTTGTTTTTCAGTCTTCATCTCGATGCAACAACTGATCCTCTAAGCTTGCATGGA
AGCTGCCCTGTTATCGAAGGTGAGAAGTGGTCTGCTACTAAATGGATTCATGTGAGGTCC
TTTGAGACTCTATTTAATAATGAATGCCAAGATCAAAACCCAAACTGCTCCCAGTGGGCT
ATTAATGGTGAATGTGAAAAAAATCCTCTATACATGGTGGGTTCTGGAAATTCTGTAGGT
CATTGTAGGAAGAGCTGTAAGGTTTGCTCCTGA