Microarray Probes on PGSC0003DMT400014656
Probe ID | Chip | Probe Sequence |
---|
CUST_6534_PI426222305 |
JHI_St_60k_v1 |
GAAAGCAGTTCAGCTTATTCATCCCCTGCAGCTTCTGCTACGGGGAATAAAAGAAGAAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014656
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014656 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G73830.1 |
+3 |
2e-60 |
197 |
128/255 (50%) |
BR enhanced expression 3 | chr1:27760027-27761346 FORWARD LENGTH=261 |
Transcript Sequence (1053 bp)
>PGSC0003DMT400014656 1053 pgsc_dm_v3.4
CAAAACTCTCTTATCACAAACAAAAAAACACACACAACATAAAGGACCAGTTCCTTCACA
CACACACAAAAATGGCTGATCATCAATTCAACTCAGACATACAAAATTTTATCACAAATT
CACCATTTTCTCTATTAAATTTCGATTCGAGCATCGATTTAATGAACCAATTTCCAGATA
TGATGAACATTCCTTGTTCATCAGACATGTCAAGTTTCAATATACAGAGTTCAATGGAAT
TTTCGAATGATAATGTTTTCACTCAAGTAGCTGATCAGTTTCCAGGAAGTTTACAAGAAA
TATTTCAAGGAAATATACAACAAGAAAGCAAAACAGAGGAAATTAATGATAGTAAAAAAA
GGAAAATTAGTGATACTCCTGAAAGCAGTTCAGCTTATTCATCCCCTGCAGCTTCTGCTA
CGGGGAATAAAAGAAGAAATACTAAAGGAAGAGGAAATAGAGTGAAAAGTGATGAAAAGG
AAGAAGAAAAACCAAGAGAAGTGGTTCATGTTAGAGCTAAGAGAGGCCAAGCAACTGATA
GTCACAGCTTAGCAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTAGGTGCTTGC
AAGATATTGTTCCAGGATGCTACAAGACAATGGGCATGGCGGGAATGTTGGATGAAATTA
TTAATTACGTGCAATCCTTGCAAAATCAAGTTGACTTCCTCTCCATGAAACTTACCGCAG
CAAGCTCATACTACGATTTCAACTCGGAATCTGACATTCTCGTGTCATTGCAGAGAGCAA
AGGCATATGAAGCACTAAAAATGCAGAAAATGATGAAGAAGGAAATTGGATGTGAAGTGA
TGTCTTCAAATCAAGTTGGTCCTAATTTTGGAAGTTATCCAATGTTGCCATACAACACCT
GAAGATTCCCCCCAATTATTTTTTTATTTTCAATCAAACTTTTTTTCCACTTGGTGCTAT
ACATTTGTAATCTTTGTACACATTGGAAAAAAGAAATTAAGAAATTTATATATTAATATA
CTTGTATTAGGACTCACTCATCTTTTATGTGGG