Microarray Probes on PGSC0003DMT400014621

Probe IDChipProbe Sequence
CUST_6725_PI426222305 JHI_St_60k_v1 CAATTGCAGATGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014621

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400014621 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G73875.1 +2 9e-114 352 180/325 (55%) DNAse I-like superfamily protein | chr1:27781112-27784571 FORWARD LENGTH=454

Transcript Sequence (1896 bp)

>PGSC0003DMT400014621 1896 pgsc_dm_v3.4
TATTTATGTCTTTTTAGTTTCACCCCTATTCGTCCTATAAAAGGTTAAACACGCGCCGCC
CAAATTCAAATCTCCCGGCAACATGGGCCGAACCGGCGACGGCAGAGATCCACCGGCGGA
ACAGCCTTCTCGGTTTTCAGCTTCAATGAAAAGTAGAATTAGTCAACATGATATTGGTAA
ACACCGTAGCAAGAAGAAGCAAAGAGTATCAATAAGTAAAACTGAAACGGAAACTGCAAC
CCTAACCCTAAATCATACTTCCACTTCTTATACACATTCATATGCAAATTCGTACTCATA
CTCGTACAGTAGGGGCAAAGAAAAACGGCATAAAGGAAAAGCAAAGAGGGCAATTGCAGA
TGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAGATAGAGTTGT
TTTTATGTCGTATAATATACTAGGGGTAAAAAATGCTGCAGCACATGAGGACCTGTACCG
CAATGTCTCTCCAAAATATTTGGATTGGGACTACCGGAAGAAGCTTATATGCAAAGAAAT
TAGGGACTATAATCCGGGTATAATGTGTTTCCAGGAGGTTGACCGTTTTGATGATTTGGA
TTATCTCCTCCAGAAAGAGGGCTTCAAAGGGGTTTATCAGGCTCGTACAGGTGATGCAAG
TGATGGTTGTGCAATATTTTGGAACAGCAAACTATTTGACATTCTGCATGAGGAGAGCAT
AGAATTCCAGAATTTTAATCTTCGCAATAATGTTTGCCAACTTTGTGCTTTCAAGATGAA
TGTGAAAAGCTCAAGCAAGGATATGAGTGCTTCAAATTCGGAGAGTGTAACCTCGCCAAG
CTTTTTGGTTGGCAATATTCACGTACTCTACAACCCCAATCGTGGAGACATCAAGTTGGG
ACAGGTTAGACTCTTTCTTGAGAGTGCCCAGAGGCTATCTCATGAATGGGGTGATATACC
AGTCGTGCTTGCTGGAGATCTAAATAGTATGCCTCAGAGTGCAATGTATCAGTTTTTGAC
TTCAAATAAGTTGGACATCCAAATGCATGACCGAAAGCAAATCTCTGGCCAAATTTATCC
ATTGCAAAATAGAAGCTTCAACCCGAGATTAAGTTATAGATGGAGTAATGAAGAGCTAAT
GCTTGCTACCGGAACAGGAGCTAGTCACTTGATACATCAGTTACAACTGCGCAGTGCCTA
TGCTGGAGCTCCTGGAAGCTCTAGAACCAGGGAAAACTCTGGAGAACCCTTGGCAACATC
ATATCATTCCAAGTTTATGGGAACTGTCGACTATATATGGTACATTTTACTTATGAGGAG
CAGTGCATTTACCTGAAATTGAGTATTACTACCATACGTCAATGGTAGTTTCCTTTTTAA
ACATTGTGAGGTGATGCAGGCACACAACAGAGTTTGTTCCAGTACGAGTTCTTGATACCT
TACCTGTTGATATTTTAAGGAGAACAAGAGGGCTTCCTAGTGAGAAATGGGGAAGTGATC
ATCTTTCTCTAGTGTGTGAACTGGCTTTCACTGATGAAGGGAGTGAGACTTGACTATTCC
TTTCGATTTAAGTTAAAAGTTGAAATACAATTTGGAAGGTCCATCATGCGTGACATACTG
CTTCATTGGATAATTCATCGGTGCATAGAAGAATCTCGCGCAAACAAAAGGAACATAAGT
GTACAAGGAGGAACATGGGAAGGAACGGAAACTGGCGAAGATACATTAAAGGGATTGAAA
AGACTATCCATTGTCTGTCCTCTTCATCTTAGTGATTTATTAATTATAAAATAAATGTTT
TATTAAATATAATAAAACCATCTGAATTATAGTTTTGCTGGATTCATCTGAAGAAAACTG
TTTCTGTTTGTTTCCAACAAAAGAATGCACTATTCA