Microarray Probes on PGSC0003DMT400013961
Probe ID | Chip | Probe Sequence |
---|
CUST_50925_PI426222305 |
JHI_St_60k_v1 |
GGTGCATTTGGCAAGGAAAGTGTAAACGATCTAAGAAAGTTTTATGGACTTATAAGGATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013961
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013961 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G46620.1 |
+1 |
4e-90 |
281 |
172/318 (54%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:19139071-19140546 REVERSE LENGTH=491 |
Transcript Sequence (954 bp)
>PGSC0003DMT400013961 954 pgsc_dm_v3.4
ATGGAACAGGATTTGAAGAACAAGGTCAAAGCCGATTTGGAAACGTTCCTAAAATCAAAG
CAGCATTATAATCGAATCGGCCGGATTTGGAAACGGAATTATTTACTTCACGGACCTTCC
GGTACAGGAAAATCAACGTTCATTGCAGCAATGGCAAATTTCCTAAGCTACGATGTGTAT
AACATTGATTTATCAAAAGTTTCAGACGATTCAGATCTGAAACTACTTCTATTGCAGAGC
ACGAATAAGTCATTGATTGTCATTGAAGATCTCGATAGTTACCTGTGTAACAACTCAACA
GCTCTAAGTTTCTCGGCGATTCTCAATTTCATGGACGGAATTTTTTCATGCTGCGGTGAC
GAACGTGTTATGATATTCACGATGAACAGCAAAGATCAGATTGATCCAGCAGTTCTAAGG
CCTGGAAGAATTGATCATCACATACACTTCCCCTTGTGTGATTTCAACGCATTCAAAAGT
CTAGCTAACAGTCATTTGGGATTGAAAGATCACAAGCTTTTCCCACAGGTAGAGGAAAAT
TTTCAAACCGGGTCGGTTTTAAGTCCGGCTGAAATCAGTGAAATCATGATTTCAAACCGG
AGTTCACCGAGTAGGGCATTGAAATTAGTGATTTCTACTCATCAGAGTAACAGCAAGCTC
GTCCCTTCGAGAACATCCGATAAAATTGAAATGATACACAATAACATTGAGGCTGACTTA
GCTCCTAAGCATCCACTATGGTTGAGCAAATCTAGATCGGTTCGACCCGTGGAGGAATCA
AGTGAGTCGGATAAGTATCCACAAGGATTGATCAAATCTAAATCGGTTCGACCCATGGTG
GAGTCGGGTGCATTTGGCAAGGAAAGTGTAAACGATCTAAGAAAGTTTTATGGACTTATA
AGGATAAAGAGTAGTAGGAAGAAATCTTTAGATTTTGATACCTCAGAAAAATAA